Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS10310

Experiment: Temperature shift 30_to_10; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Temperature shift 30_to_10; with MOPS
2,272,584	+		PFLU_RS10300	0.84	+0.7
2,272,584	+		PFLU_RS10300	0.84	+0.3
2,272,584	+		PFLU_RS10300	0.84	+1.3
2,272,584	+		PFLU_RS10300	0.84	-0.9
2,272,584	+		PFLU_RS10300	0.84	-0.3
2,272,584	+		PFLU_RS10300	0.84	-0.1
2,272,584	+		PFLU_RS10300	0.84	-0.2
2,272,584	+		PFLU_RS10300	0.84	+0.6
2,272,584	+		PFLU_RS10300	0.84	-0.1
2,272,585	-		PFLU_RS10300	0.84	-0.4
2,272,585	-		PFLU_RS10300	0.84	-0.9
2,272,585	-		PFLU_RS10300	0.84	+0.7
2,272,590	+		PFLU_RS10300	0.84	-1.2
2,272,590	+		PFLU_RS10300	0.84	-0.2
2,272,590	+		PFLU_RS10300	0.84	+0.0
2,272,590	+		PFLU_RS10300	0.84	+1.1
2,272,590	+		PFLU_RS10300	0.84	-1.2
2,272,590	+		PFLU_RS10300	0.84	+0.9
2,272,590	+		PFLU_RS10300	0.84	-1.2
2,272,590	+		PFLU_RS10300	0.84	+0.1
2,272,590	+		PFLU_RS10300	0.84	+0.3
2,272,591	-		PFLU_RS10300	0.84	+0.8
2,272,591	-		PFLU_RS10300	0.84	-1.9
2,272,591	-		PFLU_RS10300	0.84	-0.0
2,272,591	-		PFLU_RS10300	0.84	-0.3
2,272,591	-		PFLU_RS10300	0.84	-0.3
2,272,591	-		PFLU_RS10300	0.84	-0.4
2,272,591	-		PFLU_RS10300	0.84	-0.1
2,272,599	+		PFLU_RS10300	0.85	-1.0
2,272,599	+		PFLU_RS10300	0.85	+1.0
2,272,599	+		PFLU_RS10300	0.85	-1.2
2,272,599	+		PFLU_RS10300	0.85	-2.2
2,272,599	+		PFLU_RS10300	0.85	+0.1
2,272,599	+		PFLU_RS10300	0.85	+1.1
2,272,599	+		PFLU_RS10300	0.85	-0.6
2,272,599	+		PFLU_RS10300	0.85	-0.9
2,272,599	+		PFLU_RS10300	0.85	+0.1
2,272,599	+		PFLU_RS10300	0.85	+0.1
2,272,599	+		PFLU_RS10300	0.85	+0.6
2,272,600	-		PFLU_RS10300	0.85	-0.9
2,272,600	-		PFLU_RS10300	0.85	+0.9
2,272,600	-		PFLU_RS10300	0.85	+0.7
2,272,600	-		PFLU_RS10300	0.85	+1.1
2,272,600	-		PFLU_RS10300	0.85	+0.6
2,272,600	-		PFLU_RS10300	0.85	-0.2
2,272,600	-		PFLU_RS10300	0.85	+0.2
2,272,600	-		PFLU_RS10300	0.85	+1.0
2,272,600	-		PFLU_RS10300	0.85	-0.4
2,272,600	-		PFLU_RS10300	0.85	+0.7
2,272,623	+		PFLU_RS10300	0.87	-0.2
2,272,698	+				+0.0
2,272,699	-				+2.1
2,272,830	+				-0.8
2,272,830	+				+0.1
2,272,830	+				+1.5
2,272,831	-				+0.1
2,272,831	-				-2.0
2,272,847	-				+0.3
2,272,891	+		PFLU_RS10305	0.15	-0.9
2,272,891	+		PFLU_RS10305	0.15	+2.1
2,272,892	-		PFLU_RS10305	0.15	-0.5
2,272,955	+		PFLU_RS10305	0.24	+1.6
2,272,955	+		PFLU_RS10305	0.24	-0.8
2,272,955	+		PFLU_RS10305	0.24	-0.0
2,272,955	+		PFLU_RS10305	0.24	-0.4
2,272,955	+		PFLU_RS10305	0.24	-1.1
2,272,955	+		PFLU_RS10305	0.24	-0.1
2,272,955	+		PFLU_RS10305	0.24	+0.3
2,272,955	+		PFLU_RS10305	0.24	+0.7
2,272,955	+		PFLU_RS10305	0.24	-0.7
2,272,955	+		PFLU_RS10305	0.24	-1.2
2,272,956	-		PFLU_RS10305	0.24	-0.2
2,272,956	-		PFLU_RS10305	0.24	+1.4
2,272,964	-		PFLU_RS10305	0.25	+0.5
2,272,966	-		PFLU_RS10305	0.25	-0.0
2,272,978	-		PFLU_RS10305	0.27	-0.8
2,272,978	-		PFLU_RS10305	0.27	+0.8
2,272,978	-		PFLU_RS10305	0.27	-0.4
2,273,000	-		PFLU_RS10305	0.30	-0.7
2,273,017	+		PFLU_RS10305	0.32	-1.4
2,273,017	+		PFLU_RS10305	0.32	-0.0
2,273,018	-		PFLU_RS10305	0.33	+0.9
2,273,018	-		PFLU_RS10305	0.33	+0.6
2,273,018	-		PFLU_RS10305	0.33	+0.3
2,273,025	-		PFLU_RS10305	0.33	-1.2
2,273,080	+		PFLU_RS10305	0.41	-0.1
2,273,081	-		PFLU_RS10305	0.41	-2.3
2,273,140	+		PFLU_RS10305	0.49	-0.9
2,273,164	+		PFLU_RS10305	0.53	-1.2
2,273,219	+		PFLU_RS10305	0.60	+0.1
2,273,219	+		PFLU_RS10305	0.60	-1.2
2,273,219	+		PFLU_RS10305	0.60	-0.9
2,273,220	-		PFLU_RS10305	0.60	+0.9
2,273,220	-		PFLU_RS10305	0.60	-1.7
2,273,220	-		PFLU_RS10305	0.60	+0.8
2,273,220	-		PFLU_RS10305	0.60	+0.7
2,273,220	-		PFLU_RS10305	0.60	-1.2
2,273,220	-		PFLU_RS10305	0.60	-0.3
2,273,220	-		PFLU_RS10305	0.60	-0.7
2,273,283	-		PFLU_RS10305	0.69	+0.6
2,273,302	-		PFLU_RS10305	0.71	+0.8
2,273,389	+		PFLU_RS10305	0.83	+1.9
2,273,390	-		PFLU_RS10305	0.84	-0.4
2,273,390	-		PFLU_RS10305	0.84	-0.4
2,273,390	-		PFLU_RS10305	0.84	+0.7
2,273,460	-				+0.1
2,273,465	+				-0.7
2,273,519	+				-1.4
2,273,572	+				+1.1
2,273,573	-				-0.4
2,273,596	-		PFLU_RS10310	0.10	-0.5
2,273,705	+		PFLU_RS10310	0.25	-0.1
2,273,730	+		PFLU_RS10310	0.29	-0.2
2,273,747	+		PFLU_RS10310	0.31	+0.7
2,273,748	-		PFLU_RS10310	0.31	+0.6
2,273,748	-		PFLU_RS10310	0.31	+1.1
2,273,778	+		PFLU_RS10310	0.36	-2.2
2,273,787	-		PFLU_RS10310	0.37	-0.9
2,273,796	+		PFLU_RS10310	0.38	+2.3
2,273,797	-		PFLU_RS10310	0.38	-0.3
2,273,818	+		PFLU_RS10310	0.41	-0.4
2,273,819	-		PFLU_RS10310	0.41	-0.2
2,273,856	+		PFLU_RS10310	0.46	+0.3
2,273,857	-		PFLU_RS10310	0.46	+0.6
2,273,857	-		PFLU_RS10310	0.46	-0.9
2,273,857	-		PFLU_RS10310	0.46	+1.1
2,273,857	-		PFLU_RS10310	0.46	-1.3
2,273,857	-		PFLU_RS10310	0.46	-0.3
2,273,962	-		PFLU_RS10310	0.61	+0.3
2,274,075	+		PFLU_RS10310	0.76	+0.4
2,274,075	+		PFLU_RS10310	0.76	+0.1
2,274,075	+		PFLU_RS10310	0.76	+0.6
2,274,075	+		PFLU_RS10310	0.76	-0.5
2,274,075	+		PFLU_RS10310	0.76	-0.2
2,274,075	+		PFLU_RS10310	0.76	+0.4
2,274,076	-		PFLU_RS10310	0.77	+1.1
2,274,076	-		PFLU_RS10310	0.77	-0.4
2,274,076	-		PFLU_RS10310	0.77	-0.3
2,274,076	-		PFLU_RS10310	0.77	+0.4
2,274,076	-		PFLU_RS10310	0.77	+0.9
2,274,076	-		PFLU_RS10310	0.77	-1.9
2,274,094	-		PFLU_RS10310	0.79	-0.3
2,274,234	+				+0.9
2,274,345	+				-1.4
2,274,345	+				+1.7
2,274,645	+		PFLU_RS10315	0.35	-0.4
2,274,645	+		PFLU_RS10315	0.35	+0.1
2,274,645	+		PFLU_RS10315	0.35	+0.7
2,274,833	+		PFLU_RS10315	0.52	-0.4
2,274,833	+		PFLU_RS10315	0.52	-0.2
2,274,834	-		PFLU_RS10315	0.52	-0.9
2,274,834	-		PFLU_RS10315	0.52	-1.0
2,274,834	-		PFLU_RS10315	0.52	+1.6
2,274,834	-		PFLU_RS10315	0.52	-0.6
2,274,845	+		PFLU_RS10315	0.53	-1.7
2,274,845	+		PFLU_RS10315	0.53	-1.0
2,274,845	+		PFLU_RS10315	0.53	+1.1
2,274,845	+		PFLU_RS10315	0.53	-0.4
2,274,845	+		PFLU_RS10315	0.53	+0.5
2,274,845	+		PFLU_RS10315	0.53	-0.7
2,274,846	-		PFLU_RS10315	0.53	+0.9
2,274,846	-		PFLU_RS10315	0.53	+0.6
2,274,846	-		PFLU_RS10315	0.53	+0.0
2,274,846	-		PFLU_RS10315	0.53	+1.4
2,274,846	-		PFLU_RS10315	0.53	+3.5
2,274,846	-		PFLU_RS10315	0.53	+1.0
2,274,857	+		PFLU_RS10315	0.54	+0.5
2,274,857	+		PFLU_RS10315	0.54	+0.6
2,274,857	+		PFLU_RS10315	0.54	-1.3
2,274,858	-		PFLU_RS10315	0.54	+0.9
2,274,858	-		PFLU_RS10315	0.54	-0.2
2,274,858	-		PFLU_RS10315	0.54	-0.2
2,274,905	+		PFLU_RS10315	0.58	+0.6
2,274,905	+		PFLU_RS10315	0.58	+0.1
2,274,905	+		PFLU_RS10315	0.58	+0.4
2,274,905	+		PFLU_RS10315	0.58	-0.3
2,274,905	+		PFLU_RS10315	0.58	-0.2
2,274,905	+		PFLU_RS10315	0.58	+0.6
2,274,905	+		PFLU_RS10315	0.58	+0.6
2,274,906	-		PFLU_RS10315	0.58	-3.2
2,274,906	-		PFLU_RS10315	0.58	-0.6
2,274,906	-		PFLU_RS10315	0.58	+0.3
2,274,961	+		PFLU_RS10315	0.63	+1.1
2,275,244	+		PFLU_RS10315	0.88	+1.4
2,275,244	+		PFLU_RS10315	0.88	+0.3
2,275,244	+		PFLU_RS10315	0.88	+1.4
2,275,244	+		PFLU_RS10315	0.88	+1.7
2,275,244	+		PFLU_RS10315	0.88	+1.1
2,275,244	+		PFLU_RS10315	0.88	-0.0
2,275,244	+		PFLU_RS10315	0.88	-1.4
2,275,245	-		PFLU_RS10315	0.88	+0.1
2,275,245	-		PFLU_RS10315	0.88	-0.2
2,275,245	-		PFLU_RS10315	0.88	-0.3
2,275,245	-		PFLU_RS10315	0.88	-1.4
2,275,245	-		PFLU_RS10315	0.88	-1.3