Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06578 and H281DRAFT_06579 are separated by 99 nucleotides H281DRAFT_06579 and H281DRAFT_06580 are separated by 15 nucleotides
H281DRAFT_06578: H281DRAFT_06578 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 19,716 to 20,573
_06578
H281DRAFT_06579: H281DRAFT_06579 - Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase), at 20,673 to 21,695
_06579
H281DRAFT_06580: H281DRAFT_06580 - DNA-binding transcriptional regulator, LysR family, at 21,711 to 22,622
_06580
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 19.721 kb on + strand at 19.721 kb on + strand at 19.722 kb on - strand at 19.758 kb on - strand at 19.983 kb on - strand, within H281DRAFT_06578 at 20.046 kb on + strand, within H281DRAFT_06578 at 20.046 kb on + strand, within H281DRAFT_06578 at 20.047 kb on - strand at 20.297 kb on + strand, within H281DRAFT_06578 at 20.298 kb on - strand, within H281DRAFT_06578 at 20.338 kb on - strand, within H281DRAFT_06578 at 20.511 kb on + strand at 20.511 kb on + strand at 20.512 kb on - strand at 20.512 kb on - strand at 20.512 kb on - strand at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.937 kb on + strand, within H281DRAFT_06579 at 20.938 kb on - strand, within H281DRAFT_06579 at 21.040 kb on - strand, within H281DRAFT_06579 at 21.108 kb on + strand, within H281DRAFT_06579 at 21.109 kb on - strand, within H281DRAFT_06579 at 21.109 kb on - strand, within H281DRAFT_06579 at 21.450 kb on + strand, within H281DRAFT_06579 at 21.451 kb on - strand, within H281DRAFT_06579 at 21.528 kb on + strand, within H281DRAFT_06579 at 21.633 kb on + strand at 21.939 kb on + strand, within H281DRAFT_06580 at 21.940 kb on - strand, within H281DRAFT_06580 at 21.940 kb on - strand, within H281DRAFT_06580 at 21.978 kb on + strand, within H281DRAFT_06580 at 22.103 kb on - strand, within H281DRAFT_06580 at 22.238 kb on - strand, within H281DRAFT_06580 at 22.332 kb on + strand, within H281DRAFT_06580 at 22.333 kb on - strand, within H281DRAFT_06580 at 22.384 kb on + strand, within H281DRAFT_06580 at 22.396 kb on - strand, within H281DRAFT_06580 at 22.667 kb on - strand at 22.667 kb on - strand at 22.667 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 19,721 + -0.2 19,721 + -0.9 19,722 - +0.9 19,758 - +0.2 19,983 - H281DRAFT_06578 0.31 +0.4 20,046 + H281DRAFT_06578 0.38 +0.7 20,046 + H281DRAFT_06578 0.38 +0.9 20,047 - +4.1 20,297 + H281DRAFT_06578 0.68 +0.4 20,298 - H281DRAFT_06578 0.68 +0.8 20,338 - H281DRAFT_06578 0.72 -1.0 20,511 + -0.9 20,511 + +0.9 20,512 - +0.1 20,512 - -0.4 20,512 - -0.6 20,937 + H281DRAFT_06579 0.26 +0.3 20,937 + H281DRAFT_06579 0.26 +0.1 20,937 + H281DRAFT_06579 0.26 -0.7 20,937 + H281DRAFT_06579 0.26 -0.3 20,937 + H281DRAFT_06579 0.26 -1.6 20,937 + H281DRAFT_06579 0.26 -1.4 20,937 + H281DRAFT_06579 0.26 +0.4 20,938 - H281DRAFT_06579 0.26 +0.1 21,040 - H281DRAFT_06579 0.36 -1.2 21,108 + H281DRAFT_06579 0.43 +0.8 21,109 - H281DRAFT_06579 0.43 -0.2 21,109 - H281DRAFT_06579 0.43 +1.3 21,450 + H281DRAFT_06579 0.76 +1.5 21,451 - H281DRAFT_06579 0.76 -0.7 21,528 + H281DRAFT_06579 0.84 +2.9 21,633 + -0.1 21,939 + H281DRAFT_06580 0.25 -1.9 21,940 - H281DRAFT_06580 0.25 +0.6 21,940 - H281DRAFT_06580 0.25 +0.1 21,978 + H281DRAFT_06580 0.29 -0.0 22,103 - H281DRAFT_06580 0.43 +1.7 22,238 - H281DRAFT_06580 0.58 -0.6 22,332 + H281DRAFT_06580 0.68 -1.6 22,333 - H281DRAFT_06580 0.68 +1.3 22,384 + H281DRAFT_06580 0.74 +0.0 22,396 - H281DRAFT_06580 0.75 +0.2 22,667 - -0.1 22,667 - +0.4 22,667 - +0.1
Or see this region's nucleotide sequence