Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06547 and H281DRAFT_06548 overlap by 4 nucleotides H281DRAFT_06548 and H281DRAFT_06549 are separated by 24 nucleotides H281DRAFT_06549 and H281DRAFT_06550 are separated by 202 nucleotides
H281DRAFT_06547: H281DRAFT_06547 - RNA polymerase sigma-70 factor, ECF subfamily, at 32,981 to 33,499
_06547
H281DRAFT_06548: H281DRAFT_06548 - Transmembrane transcriptional regulator (anti-sigma factor RsiW), at 33,496 to 34,323
_06548
H281DRAFT_06549: H281DRAFT_06549 - transcriptional regulator, AraC family, at 34,348 to 35,229
_06549
H281DRAFT_06550: H281DRAFT_06550 - Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains, at 35,432 to 36,328
_06550
Position (kb) 34
35
36 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 33.368 kb on + strand at 34.337 kb on + strand at 34.338 kb on - strand at 34.338 kb on - strand at 34.416 kb on + strand at 34.520 kb on + strand, within H281DRAFT_06549 at 34.521 kb on - strand, within H281DRAFT_06549 at 34.521 kb on - strand, within H281DRAFT_06549 at 34.734 kb on + strand, within H281DRAFT_06549 at 35.158 kb on - strand at 35.295 kb on + strand at 35.395 kb on + strand at 35.396 kb on - strand at 35.524 kb on + strand, within H281DRAFT_06550 at 35.804 kb on + strand, within H281DRAFT_06550 at 35.805 kb on - strand, within H281DRAFT_06550 at 35.953 kb on + strand, within H281DRAFT_06550 at 35.954 kb on - strand, within H281DRAFT_06550 at 36.042 kb on + strand, within H281DRAFT_06550 at 36.042 kb on + strand, within H281DRAFT_06550 at 36.043 kb on - strand, within H281DRAFT_06550 at 36.203 kb on + strand, within H281DRAFT_06550 at 36.203 kb on + strand, within H281DRAFT_06550 at 36.204 kb on - strand, within H281DRAFT_06550
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 33,368 + -1.3 34,337 + +1.5 34,338 - -0.3 34,338 - +0.8 34,416 + -0.2 34,520 + H281DRAFT_06549 0.20 -0.3 34,521 - H281DRAFT_06549 0.20 -3.3 34,521 - H281DRAFT_06549 0.20 -0.5 34,734 + H281DRAFT_06549 0.44 -2.4 35,158 - -0.4 35,295 + +0.2 35,395 + -0.1 35,396 - +0.1 35,524 + H281DRAFT_06550 0.10 +0.2 35,804 + H281DRAFT_06550 0.41 +0.8 35,805 - H281DRAFT_06550 0.42 -1.9 35,953 + H281DRAFT_06550 0.58 -0.8 35,954 - H281DRAFT_06550 0.58 +0.7 36,042 + H281DRAFT_06550 0.68 +0.3 36,042 + H281DRAFT_06550 0.68 -0.8 36,043 - H281DRAFT_06550 0.68 -0.0 36,203 + H281DRAFT_06550 0.86 +1.4 36,203 + H281DRAFT_06550 0.86 -1.6 36,204 - H281DRAFT_06550 0.86 -2.0
Or see this region's nucleotide sequence