Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06485 and H281DRAFT_06486 are separated by 130 nucleotides H281DRAFT_06486 and H281DRAFT_06487 are separated by 91 nucleotides
H281DRAFT_06485: H281DRAFT_06485 - c-di-GMP-related signal transduction protein, contains EAL and HDOD domains, at 23,541 to 24,920
_06485
H281DRAFT_06486: H281DRAFT_06486 - Predicted signal transduction protein, at 25,051 to 26,508
_06486
H281DRAFT_06487: H281DRAFT_06487 - diguanylate cyclase (GGDEF) domain-containing protein, at 26,600 to 28,414
_06487
Position (kb) 25
26
27 Strain fitness (log2 ratio) -1
0
1
2
3 at 24.414 kb on - strand, within H281DRAFT_06485 at 24.414 kb on - strand, within H281DRAFT_06485 at 25.024 kb on - strand at 25.024 kb on - strand at 25.024 kb on - strand at 26.289 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand at 26.309 kb on + strand, within H281DRAFT_06486 at 26.309 kb on + strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.310 kb on - strand, within H281DRAFT_06486 at 26.688 kb on - strand at 26.688 kb on - strand at 26.688 kb on - strand at 26.688 kb on - strand at 27.115 kb on - strand, within H281DRAFT_06487 at 27.360 kb on + strand, within H281DRAFT_06487 at 27.360 kb on + strand, within H281DRAFT_06487 at 27.418 kb on - strand, within H281DRAFT_06487 at 27.418 kb on - strand, within H281DRAFT_06487
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 24,414 - H281DRAFT_06485 0.63 -0.1 24,414 - H281DRAFT_06485 0.63 +0.3 25,024 - +0.4 25,024 - +3.6 25,024 - -0.8 26,289 + H281DRAFT_06486 0.85 -1.1 26,309 + H281DRAFT_06486 0.86 +0.4 26,309 + +1.2 26,309 + H281DRAFT_06486 0.86 +0.0 26,309 + H281DRAFT_06486 0.86 +0.6 26,310 - H281DRAFT_06486 0.86 -0.4 26,310 - H281DRAFT_06486 0.86 +0.1 26,310 - H281DRAFT_06486 0.86 +0.3 26,310 - H281DRAFT_06486 0.86 -0.3 26,310 - H281DRAFT_06486 0.86 -0.8 26,688 - +0.3 26,688 - -0.1 26,688 - +1.6 26,688 - -0.2 27,115 - H281DRAFT_06487 0.28 +0.1 27,360 + H281DRAFT_06487 0.42 -0.4 27,360 + H281DRAFT_06487 0.42 +0.8 27,418 - H281DRAFT_06487 0.45 +0.4 27,418 - H281DRAFT_06487 0.45 +0.3
Or see this region's nucleotide sequence