Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06474 and H281DRAFT_06475 are separated by 4 nucleotides H281DRAFT_06475 and H281DRAFT_06476 are separated by 78 nucleotides H281DRAFT_06476 and H281DRAFT_06477 are separated by 54 nucleotides
H281DRAFT_06474: H281DRAFT_06474 - amino acid ABC transporter membrane protein 1, PAAT family, at 11,333 to 12,022
_06474
H281DRAFT_06475: H281DRAFT_06475 - amino acid ABC transporter membrane protein 2, PAAT family, at 12,027 to 12,740
_06475
H281DRAFT_06476: H281DRAFT_06476 - amino acid ABC transporter ATP-binding protein, PAAT family, at 12,819 to 13,610
_06476
H281DRAFT_06477: H281DRAFT_06477 - transcriptional regulator, AraC family, at 13,665 to 14,684
_06477
Position (kb) 12
13
14 Strain fitness (log2 ratio) -1
0
1 at 12.241 kb on - strand, within H281DRAFT_06475 at 12.274 kb on - strand at 12.274 kb on - strand, within H281DRAFT_06475 at 12.274 kb on - strand, within H281DRAFT_06475 at 12.372 kb on + strand, within H281DRAFT_06475 at 12.373 kb on - strand, within H281DRAFT_06475 at 12.442 kb on - strand, within H281DRAFT_06475 at 12.446 kb on + strand, within H281DRAFT_06475 at 12.514 kb on - strand, within H281DRAFT_06475 at 12.518 kb on + strand at 12.615 kb on + strand, within H281DRAFT_06475 at 12.654 kb on + strand, within H281DRAFT_06475 at 13.625 kb on + strand at 14.410 kb on - strand, within H281DRAFT_06477 at 14.433 kb on + strand, within H281DRAFT_06477
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 12,241 - H281DRAFT_06475 0.30 -0.9 12,274 - +0.8 12,274 - H281DRAFT_06475 0.35 -0.3 12,274 - H281DRAFT_06475 0.35 +0.0 12,372 + H281DRAFT_06475 0.48 +0.2 12,373 - H281DRAFT_06475 0.48 +0.6 12,442 - H281DRAFT_06475 0.58 +0.3 12,446 + H281DRAFT_06475 0.59 +0.1 12,514 - H281DRAFT_06475 0.68 +0.0 12,518 + -1.5 12,615 + H281DRAFT_06475 0.82 -0.4 12,654 + H281DRAFT_06475 0.88 -1.1 13,625 + +0.5 14,410 - H281DRAFT_06477 0.73 +1.5 14,433 + H281DRAFT_06477 0.75 +0.3
Or see this region's nucleotide sequence