Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06454 and H281DRAFT_06455 are separated by 159 nucleotides H281DRAFT_06455 and H281DRAFT_06456 overlap by 102 nucleotides H281DRAFT_06456 and H281DRAFT_06457 are separated by 587 nucleotides
H281DRAFT_06454: H281DRAFT_06454 - NAD(P)H-nitrite reductase, at 63,281 to 64,810
_06454
H281DRAFT_06455: H281DRAFT_06455 - transcriptional regulator, TraR/DksA family, at 64,970 to 65,350
_06455
H281DRAFT_06456: H281DRAFT_06456 - hypothetical protein, at 65,249 to 65,656
_06456
H281DRAFT_06457: H281DRAFT_06457 - hypothetical protein, at 66,244 to 66,456
_06457
Position (kb) 65
66 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 64.381 kb on - strand, within H281DRAFT_06454 at 64.417 kb on - strand, within H281DRAFT_06454 at 64.493 kb on - strand, within H281DRAFT_06454 at 64.502 kb on + strand, within H281DRAFT_06454 at 64.620 kb on - strand, within H281DRAFT_06454 at 64.620 kb on - strand, within H281DRAFT_06454 at 64.622 kb on - strand, within H281DRAFT_06454 at 64.638 kb on - strand, within H281DRAFT_06454 at 64.932 kb on - strand at 64.976 kb on - strand at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.153 kb on + strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.154 kb on - strand, within H281DRAFT_06455 at 65.240 kb on + strand, within H281DRAFT_06455 at 65.241 kb on - strand, within H281DRAFT_06455 at 65.241 kb on - strand, within H281DRAFT_06455 at 65.258 kb on - strand at 65.258 kb on - strand at 65.490 kb on + strand, within H281DRAFT_06456 at 65.491 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.498 kb on - strand, within H281DRAFT_06456 at 65.500 kb on + strand, within H281DRAFT_06456 at 65.587 kb on - strand, within H281DRAFT_06456 at 65.688 kb on + strand at 65.734 kb on + strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.806 kb on - strand at 65.928 kb on - strand at 65.953 kb on + strand at 66.154 kb on - strand at 66.212 kb on + strand at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.371 kb on + strand, within H281DRAFT_06457 at 66.372 kb on - strand, within H281DRAFT_06457 at 66.372 kb on - strand, within H281DRAFT_06457 at 66.404 kb on + strand, within H281DRAFT_06457 at 66.441 kb on + strand at 66.442 kb on - strand at 66.484 kb on + strand at 66.485 kb on - strand at 66.485 kb on - strand at 66.622 kb on + strand at 66.623 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 64,381 - H281DRAFT_06454 0.72 +0.2 64,417 - H281DRAFT_06454 0.74 +0.3 64,493 - H281DRAFT_06454 0.79 -0.3 64,502 + H281DRAFT_06454 0.80 -0.4 64,620 - H281DRAFT_06454 0.88 -0.6 64,620 - H281DRAFT_06454 0.88 +1.2 64,622 - H281DRAFT_06454 0.88 +0.5 64,638 - H281DRAFT_06454 0.89 -0.8 64,932 - +0.1 64,976 - -0.5 65,153 + H281DRAFT_06455 0.48 +0.7 65,153 + H281DRAFT_06455 0.48 +0.1 65,153 + H281DRAFT_06455 0.48 -1.0 65,153 + H281DRAFT_06455 0.48 +0.8 65,154 - H281DRAFT_06455 0.48 -0.6 65,154 - H281DRAFT_06455 0.48 +0.1 65,154 - H281DRAFT_06455 0.48 +0.6 65,154 - H281DRAFT_06455 0.48 +0.3 65,154 - H281DRAFT_06455 0.48 -0.6 65,154 - H281DRAFT_06455 0.48 -0.1 65,240 + H281DRAFT_06455 0.71 +0.6 65,241 - H281DRAFT_06455 0.71 +1.0 65,241 - H281DRAFT_06455 0.71 -2.8 65,258 - -0.2 65,258 - +0.0 65,490 + H281DRAFT_06456 0.59 +1.5 65,491 - H281DRAFT_06456 0.59 +0.3 65,498 - H281DRAFT_06456 0.61 -0.5 65,498 - H281DRAFT_06456 0.61 +0.3 65,500 + H281DRAFT_06456 0.62 -1.5 65,587 - H281DRAFT_06456 0.83 -0.5 65,688 + -0.8 65,734 + -0.3 65,806 - -0.1 65,806 - -2.1 65,806 - +0.5 65,928 - +1.5 65,953 + -0.7 66,154 - +0.3 66,212 + +0.0 66,371 + H281DRAFT_06457 0.60 -0.3 66,371 + H281DRAFT_06457 0.60 +1.9 66,371 + H281DRAFT_06457 0.60 +0.3 66,371 + H281DRAFT_06457 0.60 +0.6 66,371 + H281DRAFT_06457 0.60 -1.9 66,371 + H281DRAFT_06457 0.60 +1.3 66,372 - H281DRAFT_06457 0.60 +1.9 66,372 - H281DRAFT_06457 0.60 -0.5 66,404 + H281DRAFT_06457 0.75 -0.2 66,441 + +0.4 66,442 - +0.6 66,484 + +0.4 66,485 - +0.3 66,485 - +1.9 66,622 + +0.9 66,623 - -0.5
Or see this region's nucleotide sequence