Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06440 and H281DRAFT_06441 are separated by 72 nucleotides H281DRAFT_06441 and H281DRAFT_06442 are separated by 42 nucleotides
H281DRAFT_06440: H281DRAFT_06440 - oxidoreductase alpha (molybdopterin) subunit, at 43,643 to 45,970
_06440
H281DRAFT_06441: H281DRAFT_06441 - cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein (EC 1.10.3.10), at 46,043 to 47,437
_06441
H281DRAFT_06442: H281DRAFT_06442 - cytochrome d ubiquinol oxidase subunit II, at 47,480 to 48,466
_06442
Position (kb) 46
47
48 Strain fitness (log2 ratio) -1
0
1
2 at 45.096 kb on + strand, within H281DRAFT_06440 at 45.097 kb on - strand, within H281DRAFT_06440 at 45.202 kb on - strand, within H281DRAFT_06440 at 45.375 kb on - strand, within H281DRAFT_06440 at 45.437 kb on + strand, within H281DRAFT_06440 at 45.437 kb on + strand, within H281DRAFT_06440 at 45.437 kb on + strand, within H281DRAFT_06440 at 45.438 kb on - strand, within H281DRAFT_06440 at 45.438 kb on - strand, within H281DRAFT_06440 at 45.523 kb on + strand, within H281DRAFT_06440 at 45.524 kb on - strand, within H281DRAFT_06440 at 45.629 kb on + strand, within H281DRAFT_06440 at 45.630 kb on - strand, within H281DRAFT_06440 at 45.645 kb on - strand, within H281DRAFT_06440 at 45.662 kb on + strand, within H281DRAFT_06440 at 45.843 kb on - strand at 45.972 kb on + strand at 46.039 kb on + strand at 46.040 kb on - strand at 46.105 kb on - strand at 46.105 kb on - strand at 46.304 kb on + strand, within H281DRAFT_06441 at 47.013 kb on - strand, within H281DRAFT_06441 at 47.229 kb on - strand, within H281DRAFT_06441 at 47.459 kb on - strand at 47.552 kb on + strand at 47.721 kb on - strand, within H281DRAFT_06442 at 47.744 kb on + strand, within H281DRAFT_06442 at 47.745 kb on - strand, within H281DRAFT_06442 at 47.745 kb on - strand, within H281DRAFT_06442 at 47.745 kb on - strand, within H281DRAFT_06442 at 47.965 kb on - strand, within H281DRAFT_06442 at 48.064 kb on + strand at 48.210 kb on - strand, within H281DRAFT_06442 at 48.210 kb on - strand, within H281DRAFT_06442 at 48.305 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 45,096 + H281DRAFT_06440 0.62 -0.2 45,097 - H281DRAFT_06440 0.62 +0.4 45,202 - H281DRAFT_06440 0.67 -0.5 45,375 - H281DRAFT_06440 0.74 -0.0 45,437 + H281DRAFT_06440 0.77 +0.6 45,437 + H281DRAFT_06440 0.77 +0.2 45,437 + H281DRAFT_06440 0.77 -0.5 45,438 - H281DRAFT_06440 0.77 -0.6 45,438 - H281DRAFT_06440 0.77 +0.2 45,523 + H281DRAFT_06440 0.81 -0.2 45,524 - H281DRAFT_06440 0.81 -0.2 45,629 + H281DRAFT_06440 0.85 -0.6 45,630 - H281DRAFT_06440 0.85 -0.5 45,645 - H281DRAFT_06440 0.86 +0.3 45,662 + H281DRAFT_06440 0.87 +0.4 45,843 - +0.2 45,972 + +2.2 46,039 + -0.9 46,040 - -1.3 46,105 - +0.2 46,105 - +0.8 46,304 + H281DRAFT_06441 0.19 -1.0 47,013 - H281DRAFT_06441 0.70 -0.9 47,229 - H281DRAFT_06441 0.85 -0.7 47,459 - +0.0 47,552 + -0.1 47,721 - H281DRAFT_06442 0.24 +0.5 47,744 + H281DRAFT_06442 0.27 +1.2 47,745 - H281DRAFT_06442 0.27 +0.3 47,745 - H281DRAFT_06442 0.27 -0.4 47,745 - H281DRAFT_06442 0.27 +0.3 47,965 - H281DRAFT_06442 0.49 +2.5 48,064 + -1.4 48,210 - H281DRAFT_06442 0.74 -0.2 48,210 - H281DRAFT_06442 0.74 +0.5 48,305 + +0.9
Or see this region's nucleotide sequence