Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06342 and H281DRAFT_06343 are separated by 53 nucleotides H281DRAFT_06343 and H281DRAFT_06344 are separated by 6 nucleotides
H281DRAFT_06342: H281DRAFT_06342 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, at 16,383 to 17,804
_06342
H281DRAFT_06343: H281DRAFT_06343 - transcriptional regulator, AsnC family, at 17,858 to 18,355
_06343
H281DRAFT_06344: H281DRAFT_06344 - transcriptional regulator, LysR family, at 18,362 to 19,285
_06344
Position (kb) 17
18
19 Strain fitness (log2 ratio) -1
0
1
2 at 16.936 kb on - strand, within H281DRAFT_06342 at 17.286 kb on + strand, within H281DRAFT_06342 at 17.341 kb on - strand, within H281DRAFT_06342 at 17.529 kb on - strand, within H281DRAFT_06342 at 17.803 kb on - strand at 17.803 kb on - strand at 17.846 kb on + strand at 17.847 kb on - strand at 18.012 kb on - strand, within H281DRAFT_06343 at 18.185 kb on + strand, within H281DRAFT_06343 at 18.282 kb on - strand, within H281DRAFT_06343 at 18.354 kb on - strand at 18.776 kb on + strand, within H281DRAFT_06344 at 18.776 kb on + strand, within H281DRAFT_06344 at 18.839 kb on - strand, within H281DRAFT_06344 at 18.986 kb on - strand at 18.986 kb on - strand, within H281DRAFT_06344 at 19.072 kb on + strand, within H281DRAFT_06344 at 19.176 kb on + strand, within H281DRAFT_06344 at 19.176 kb on + strand, within H281DRAFT_06344 at 19.177 kb on - strand, within H281DRAFT_06344
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 16,936 - H281DRAFT_06342 0.39 -0.0 17,286 + H281DRAFT_06342 0.64 +1.9 17,341 - H281DRAFT_06342 0.67 -0.8 17,529 - H281DRAFT_06342 0.81 +0.4 17,803 - +0.4 17,803 - +0.5 17,846 + -0.2 17,847 - +0.0 18,012 - H281DRAFT_06343 0.31 +1.3 18,185 + H281DRAFT_06343 0.66 +1.2 18,282 - H281DRAFT_06343 0.85 +0.6 18,354 - +0.3 18,776 + H281DRAFT_06344 0.45 -0.0 18,776 + H281DRAFT_06344 0.45 +1.2 18,839 - H281DRAFT_06344 0.52 -0.7 18,986 - +2.0 18,986 - H281DRAFT_06344 0.68 +2.1 19,072 + H281DRAFT_06344 0.77 -0.5 19,176 + H281DRAFT_06344 0.88 -1.0 19,176 + H281DRAFT_06344 0.88 -0.8 19,177 - H281DRAFT_06344 0.88 -0.4
Or see this region's nucleotide sequence