Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06208 and H281DRAFT_06209 are separated by 40 nucleotides H281DRAFT_06209 and H281DRAFT_06210 overlap by 4 nucleotides
H281DRAFT_06208: H281DRAFT_06208 - Sugar phosphate permease, at 100,578 to 101,780
_06208
H281DRAFT_06209: H281DRAFT_06209 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 101,821 to 102,693
_06209
H281DRAFT_06210: H281DRAFT_06210 - aconitate hydratase, at 102,690 to 105,386
_06210
Position (kb) 101
102
103 Strain fitness (log2 ratio) -2
-1
0
1
2 at 100.823 kb on - strand, within H281DRAFT_06208 at 100.840 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.898 kb on + strand, within H281DRAFT_06208 at 100.899 kb on - strand, within H281DRAFT_06208 at 100.900 kb on + strand, within H281DRAFT_06208 at 100.908 kb on - strand, within H281DRAFT_06208 at 100.908 kb on - strand, within H281DRAFT_06208 at 100.909 kb on + strand, within H281DRAFT_06208 at 100.910 kb on - strand, within H281DRAFT_06208 at 100.910 kb on - strand, within H281DRAFT_06208 at 100.929 kb on + strand, within H281DRAFT_06208 at 100.929 kb on + strand, within H281DRAFT_06208 at 100.930 kb on - strand, within H281DRAFT_06208 at 100.933 kb on + strand, within H281DRAFT_06208 at 101.021 kb on + strand, within H281DRAFT_06208 at 101.022 kb on - strand, within H281DRAFT_06208 at 101.023 kb on + strand, within H281DRAFT_06208 at 101.024 kb on - strand, within H281DRAFT_06208 at 101.253 kb on + strand, within H281DRAFT_06208 at 101.265 kb on + strand, within H281DRAFT_06208 at 101.643 kb on + strand, within H281DRAFT_06208 at 101.713 kb on - strand at 101.775 kb on - strand at 101.855 kb on + strand at 101.856 kb on - strand at 101.920 kb on + strand, within H281DRAFT_06209 at 101.920 kb on + strand, within H281DRAFT_06209 at 101.921 kb on - strand, within H281DRAFT_06209 at 101.970 kb on + strand, within H281DRAFT_06209 at 101.970 kb on + strand, within H281DRAFT_06209 at 101.971 kb on - strand, within H281DRAFT_06209 at 101.971 kb on - strand, within H281DRAFT_06209 at 102.041 kb on - strand, within H281DRAFT_06209 at 102.298 kb on + strand, within H281DRAFT_06209 at 102.453 kb on + strand, within H281DRAFT_06209 at 102.454 kb on - strand, within H281DRAFT_06209 at 102.454 kb on - strand, within H281DRAFT_06209 at 102.484 kb on - strand, within H281DRAFT_06209 at 102.540 kb on - strand, within H281DRAFT_06209 at 102.540 kb on - strand, within H281DRAFT_06209 at 102.543 kb on + strand, within H281DRAFT_06209 at 102.750 kb on + strand at 103.397 kb on + strand, within H281DRAFT_06210 at 103.397 kb on + strand, within H281DRAFT_06210 at 103.397 kb on + strand at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.398 kb on - strand, within H281DRAFT_06210 at 103.427 kb on + strand, within H281DRAFT_06210 at 103.428 kb on - strand, within H281DRAFT_06210 at 103.451 kb on + strand, within H281DRAFT_06210 at 103.452 kb on - strand, within H281DRAFT_06210 at 103.455 kb on - strand, within H281DRAFT_06210 at 103.513 kb on + strand, within H281DRAFT_06210 at 103.600 kb on + strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210 at 103.601 kb on - strand, within H281DRAFT_06210
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 100,823 - H281DRAFT_06208 0.20 -0.5 100,840 + H281DRAFT_06208 0.22 +0.8 100,898 + H281DRAFT_06208 0.27 -1.1 100,898 + H281DRAFT_06208 0.27 -1.9 100,898 + H281DRAFT_06208 0.27 +0.2 100,899 - H281DRAFT_06208 0.27 -0.3 100,900 + H281DRAFT_06208 0.27 -0.1 100,908 - H281DRAFT_06208 0.27 -0.1 100,908 - H281DRAFT_06208 0.27 -0.9 100,909 + H281DRAFT_06208 0.28 -0.2 100,910 - H281DRAFT_06208 0.28 +1.1 100,910 - H281DRAFT_06208 0.28 +0.3 100,929 + H281DRAFT_06208 0.29 -1.3 100,929 + H281DRAFT_06208 0.29 -0.3 100,930 - H281DRAFT_06208 0.29 +0.1 100,933 + H281DRAFT_06208 0.30 +0.3 101,021 + H281DRAFT_06208 0.37 +1.2 101,022 - H281DRAFT_06208 0.37 +0.2 101,023 + H281DRAFT_06208 0.37 -0.1 101,024 - H281DRAFT_06208 0.37 +1.7 101,253 + H281DRAFT_06208 0.56 +0.1 101,265 + H281DRAFT_06208 0.57 -1.5 101,643 + H281DRAFT_06208 0.89 -0.3 101,713 - -0.7 101,775 - +0.7 101,855 + -0.0 101,856 - +0.0 101,920 + H281DRAFT_06209 0.11 -2.0 101,920 + H281DRAFT_06209 0.11 -0.6 101,921 - H281DRAFT_06209 0.11 -0.5 101,970 + H281DRAFT_06209 0.17 -0.1 101,970 + H281DRAFT_06209 0.17 -0.2 101,971 - H281DRAFT_06209 0.17 +0.8 101,971 - H281DRAFT_06209 0.17 -0.2 102,041 - H281DRAFT_06209 0.25 -0.4 102,298 + H281DRAFT_06209 0.55 +0.3 102,453 + H281DRAFT_06209 0.72 +0.6 102,454 - H281DRAFT_06209 0.73 +0.8 102,454 - H281DRAFT_06209 0.73 -0.1 102,484 - H281DRAFT_06209 0.76 +0.0 102,540 - H281DRAFT_06209 0.82 -0.3 102,540 - H281DRAFT_06209 0.82 +1.1 102,543 + H281DRAFT_06209 0.83 +0.5 102,750 + -1.3 103,397 + H281DRAFT_06210 0.26 +0.5 103,397 + H281DRAFT_06210 0.26 +0.3 103,397 + -1.4 103,398 - H281DRAFT_06210 0.26 -0.0 103,398 - H281DRAFT_06210 0.26 +0.1 103,398 - H281DRAFT_06210 0.26 +0.6 103,398 - H281DRAFT_06210 0.26 +2.5 103,427 + H281DRAFT_06210 0.27 +0.2 103,428 - H281DRAFT_06210 0.27 -0.1 103,451 + H281DRAFT_06210 0.28 +0.6 103,452 - H281DRAFT_06210 0.28 +0.7 103,455 - H281DRAFT_06210 0.28 +0.1 103,513 + H281DRAFT_06210 0.31 +0.5 103,600 + H281DRAFT_06210 0.34 -0.6 103,601 - H281DRAFT_06210 0.34 +0.0 103,601 - H281DRAFT_06210 0.34 -1.5 103,601 - H281DRAFT_06210 0.34 +0.7
Or see this region's nucleotide sequence