Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06078 and H281DRAFT_06079 are separated by 113 nucleotides H281DRAFT_06079 and H281DRAFT_06080 are separated by 292 nucleotides H281DRAFT_06080 and H281DRAFT_06081 are separated by 59 nucleotides H281DRAFT_06081 and H281DRAFT_06082 are separated by 53 nucleotides
H281DRAFT_06078: H281DRAFT_06078 - protein of unknown function (DUF4148), at 95,572 to 95,883
_06078
H281DRAFT_06079: H281DRAFT_06079 - Uncharacterized membrane protein, DUF373 family, at 95,997 to 96,563
_06079
H281DRAFT_06080: H281DRAFT_06080 - thioredoxin reductase (NADPH), at 96,856 to 98,091
_06080
H281DRAFT_06081: H281DRAFT_06081 - ubiquitin-hydrolase Zn-finger-containing protein, at 98,151 to 98,423
_06081
H281DRAFT_06082: H281DRAFT_06082 - ATP-dependent Clp protease ATP-binding subunit ClpC, at 98,477 to 101,311
_06082
Position (kb) 96
97
98
99 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 95.869 kb on + strand at 95.870 kb on - strand at 95.889 kb on + strand at 96.201 kb on - strand, within H281DRAFT_06079 at 96.203 kb on + strand, within H281DRAFT_06079 at 96.203 kb on + strand, within H281DRAFT_06079 at 96.241 kb on - strand, within H281DRAFT_06079 at 96.349 kb on + strand, within H281DRAFT_06079 at 96.349 kb on + strand, within H281DRAFT_06079 at 96.537 kb on - strand at 96.630 kb on + strand at 96.705 kb on - strand at 96.774 kb on + strand at 96.775 kb on - strand at 96.775 kb on - strand at 97.111 kb on + strand, within H281DRAFT_06080 at 97.112 kb on - strand, within H281DRAFT_06080 at 97.112 kb on - strand, within H281DRAFT_06080 at 97.162 kb on + strand, within H281DRAFT_06080 at 97.163 kb on + strand, within H281DRAFT_06080 at 97.163 kb on - strand, within H281DRAFT_06080 at 97.190 kb on + strand, within H281DRAFT_06080 at 97.190 kb on + strand at 97.191 kb on - strand, within H281DRAFT_06080 at 97.193 kb on + strand, within H281DRAFT_06080 at 97.193 kb on + strand, within H281DRAFT_06080 at 97.386 kb on - strand, within H281DRAFT_06080 at 97.386 kb on - strand, within H281DRAFT_06080 at 97.408 kb on - strand, within H281DRAFT_06080 at 97.408 kb on - strand, within H281DRAFT_06080 at 97.426 kb on - strand, within H281DRAFT_06080 at 97.498 kb on + strand, within H281DRAFT_06080 at 97.501 kb on + strand, within H281DRAFT_06080 at 97.547 kb on + strand, within H281DRAFT_06080 at 97.547 kb on + strand, within H281DRAFT_06080 at 97.547 kb on + strand, within H281DRAFT_06080 at 97.548 kb on - strand, within H281DRAFT_06080 at 97.549 kb on + strand, within H281DRAFT_06080 at 97.549 kb on + strand, within H281DRAFT_06080 at 97.549 kb on + strand, within H281DRAFT_06080 at 97.549 kb on + strand, within H281DRAFT_06080 at 97.549 kb on + strand, within H281DRAFT_06080 at 97.549 kb on + strand, within H281DRAFT_06080 at 97.619 kb on - strand, within H281DRAFT_06080 at 97.619 kb on - strand, within H281DRAFT_06080 at 97.699 kb on + strand, within H281DRAFT_06080 at 97.704 kb on - strand, within H281DRAFT_06080 at 97.886 kb on - strand, within H281DRAFT_06080 at 97.886 kb on - strand, within H281DRAFT_06080 at 97.971 kb on + strand at 97.972 kb on - strand at 97.972 kb on - strand at 97.972 kb on - strand at 97.972 kb on - strand at 98.082 kb on + strand at 98.128 kb on + strand at 98.128 kb on + strand at 98.144 kb on + strand at 98.145 kb on - strand at 98.245 kb on + strand, within H281DRAFT_06081 at 98.252 kb on - strand, within H281DRAFT_06081
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 95,869 + -0.1 95,870 - +1.2 95,889 + -0.2 96,201 - H281DRAFT_06079 0.36 -0.2 96,203 + H281DRAFT_06079 0.36 +0.1 96,203 + H281DRAFT_06079 0.36 -0.0 96,241 - H281DRAFT_06079 0.43 +0.2 96,349 + H281DRAFT_06079 0.62 +1.1 96,349 + H281DRAFT_06079 0.62 +1.4 96,537 - +0.2 96,630 + -0.9 96,705 - -1.5 96,774 + +0.8 96,775 - +0.5 96,775 - +0.4 97,111 + H281DRAFT_06080 0.21 -0.7 97,112 - H281DRAFT_06080 0.21 +1.7 97,112 - H281DRAFT_06080 0.21 +0.8 97,162 + H281DRAFT_06080 0.25 -0.9 97,163 + H281DRAFT_06080 0.25 -0.5 97,163 - H281DRAFT_06080 0.25 +0.2 97,190 + H281DRAFT_06080 0.27 -0.2 97,190 + +2.5 97,191 - H281DRAFT_06080 0.27 -0.2 97,193 + H281DRAFT_06080 0.27 -0.8 97,193 + H281DRAFT_06080 0.27 +0.6 97,386 - H281DRAFT_06080 0.43 -0.4 97,386 - H281DRAFT_06080 0.43 +0.5 97,408 - H281DRAFT_06080 0.45 +1.1 97,408 - H281DRAFT_06080 0.45 +0.2 97,426 - H281DRAFT_06080 0.46 -0.3 97,498 + H281DRAFT_06080 0.52 +0.0 97,501 + H281DRAFT_06080 0.52 -0.1 97,547 + H281DRAFT_06080 0.56 -1.0 97,547 + H281DRAFT_06080 0.56 -0.7 97,547 + H281DRAFT_06080 0.56 +2.0 97,548 - H281DRAFT_06080 0.56 +0.3 97,549 + H281DRAFT_06080 0.56 +0.3 97,549 + H281DRAFT_06080 0.56 +0.3 97,549 + H281DRAFT_06080 0.56 +0.3 97,549 + H281DRAFT_06080 0.56 +0.1 97,549 + H281DRAFT_06080 0.56 +0.6 97,549 + H281DRAFT_06080 0.56 +0.8 97,619 - H281DRAFT_06080 0.62 +0.6 97,619 - H281DRAFT_06080 0.62 +0.3 97,699 + H281DRAFT_06080 0.68 -1.3 97,704 - H281DRAFT_06080 0.69 +1.1 97,886 - H281DRAFT_06080 0.83 +0.8 97,886 - H281DRAFT_06080 0.83 -0.7 97,971 + +0.0 97,972 - +0.4 97,972 - -3.0 97,972 - +0.2 97,972 - +0.8 98,082 + +1.1 98,128 + -1.4 98,128 + -0.2 98,144 + +1.4 98,145 - -3.6 98,245 + H281DRAFT_06081 0.34 -1.7 98,252 - H281DRAFT_06081 0.37 -0.3
Or see this region's nucleotide sequence