Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06071 and H281DRAFT_06072 are separated by 405 nucleotides H281DRAFT_06072 and H281DRAFT_06073 are separated by 86 nucleotides H281DRAFT_06073 and H281DRAFT_06074 are separated by 86 nucleotides H281DRAFT_06074 and H281DRAFT_06075 are separated by 5 nucleotides
H281DRAFT_06071: H281DRAFT_06071 - aspartate semialdehyde dehydrogenase, at 86,968 to 88,089
_06071
H281DRAFT_06072: H281DRAFT_06072 - 3-isopropylmalate dehydrogenase, at 88,495 to 89,562
_06072
H281DRAFT_06073: H281DRAFT_06073 - 3-isopropylmalate dehydratase, small subunit, at 89,649 to 90,302
_06073
H281DRAFT_06074: H281DRAFT_06074 - entericidin A, at 90,389 to 90,547
_06074
H281DRAFT_06075: H281DRAFT_06075 - 3-isopropylmalate dehydratase, large subunit, at 90,553 to 91,962
_06075
Position (kb) 88
89
90 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1
2 at 88.307 kb on - strand at 88.307 kb on - strand at 88.307 kb on - strand at 88.312 kb on - strand at 88.312 kb on - strand at 88.365 kb on + strand at 88.469 kb on + strand at 88.493 kb on - strand at 88.496 kb on + strand at 88.496 kb on + strand at 88.496 kb on + strand at 88.497 kb on - strand at 88.647 kb on - strand, within H281DRAFT_06072 at 88.739 kb on + strand, within H281DRAFT_06072 at 88.740 kb on - strand, within H281DRAFT_06072 at 88.740 kb on - strand, within H281DRAFT_06072 at 88.740 kb on - strand, within H281DRAFT_06072 at 88.904 kb on + strand at 88.905 kb on - strand, within H281DRAFT_06072 at 88.905 kb on - strand, within H281DRAFT_06072 at 88.905 kb on - strand, within H281DRAFT_06072 at 88.931 kb on + strand, within H281DRAFT_06072 at 89.159 kb on + strand, within H281DRAFT_06072 at 89.159 kb on + strand, within H281DRAFT_06072 at 89.159 kb on + strand, within H281DRAFT_06072 at 89.605 kb on + strand at 89.605 kb on + strand at 89.606 kb on - strand at 89.650 kb on + strand at 89.704 kb on + strand at 89.770 kb on + strand, within H281DRAFT_06073 at 89.771 kb on - strand, within H281DRAFT_06073 at 89.875 kb on + strand, within H281DRAFT_06073 at 89.876 kb on - strand, within H281DRAFT_06073 at 89.954 kb on - strand, within H281DRAFT_06073 at 90.296 kb on + strand at 90.297 kb on - strand at 90.497 kb on - strand, within H281DRAFT_06074 at 90.497 kb on - strand, within H281DRAFT_06074 at 90.497 kb on - strand, within H281DRAFT_06074
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 88,307 - +1.8 88,307 - +0.5 88,307 - +0.0 88,312 - +1.5 88,312 - +0.8 88,365 + -0.8 88,469 + -0.3 88,493 - -1.7 88,496 + -0.2 88,496 + -0.4 88,496 + +2.1 88,497 - +1.4 88,647 - H281DRAFT_06072 0.14 -4.3 88,739 + H281DRAFT_06072 0.23 -5.2 88,740 - H281DRAFT_06072 0.23 -3.7 88,740 - H281DRAFT_06072 0.23 -4.3 88,740 - H281DRAFT_06072 0.23 -3.6 88,904 + -0.6 88,905 - H281DRAFT_06072 0.38 -3.3 88,905 - H281DRAFT_06072 0.38 -4.8 88,905 - H281DRAFT_06072 0.38 -5.0 88,931 + H281DRAFT_06072 0.41 -3.1 89,159 + H281DRAFT_06072 0.62 -5.8 89,159 + H281DRAFT_06072 0.62 -2.6 89,159 + H281DRAFT_06072 0.62 -3.2 89,605 + -1.7 89,605 + -5.2 89,606 - +0.0 89,650 + -3.9 89,704 + -4.0 89,770 + H281DRAFT_06073 0.19 -4.8 89,771 - H281DRAFT_06073 0.19 -0.8 89,875 + H281DRAFT_06073 0.35 -5.3 89,876 - H281DRAFT_06073 0.35 -5.1 89,954 - H281DRAFT_06073 0.47 -1.5 90,296 + -4.2 90,297 - -5.1 90,497 - H281DRAFT_06074 0.68 +0.1 90,497 - H281DRAFT_06074 0.68 +0.7 90,497 - H281DRAFT_06074 0.68 -0.2
Or see this region's nucleotide sequence