Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06057 and H281DRAFT_06058 are separated by 33 nucleotides H281DRAFT_06058 and H281DRAFT_06059 are separated by 124 nucleotides H281DRAFT_06059 and H281DRAFT_06060 are separated by 323 nucleotides
H281DRAFT_06057: H281DRAFT_06057 - FKBP-type peptidyl-prolyl cis-trans isomerase FkpA, at 71,517 to 71,858
_06057
H281DRAFT_06058: H281DRAFT_06058 - transcriptional regulator, AraC family, at 71,892 to 72,674
_06058
H281DRAFT_06059: H281DRAFT_06059 - O-succinylhomoserine sulfhydrylase, at 72,799 to 73,989
_06059
H281DRAFT_06060: H281DRAFT_06060 - amidophosphoribosyltransferase, at 74,313 to 75,863
_06060
Position (kb) 72
73
74 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 71.857 kb on - strand at 71.857 kb on - strand at 72.084 kb on + strand, within H281DRAFT_06058 at 72.085 kb on - strand, within H281DRAFT_06058 at 72.198 kb on - strand, within H281DRAFT_06058 at 72.528 kb on - strand, within H281DRAFT_06058 at 72.541 kb on + strand, within H281DRAFT_06058 at 72.541 kb on + strand at 72.611 kb on + strand at 72.611 kb on + strand at 72.612 kb on - strand at 72.612 kb on - strand at 72.770 kb on + strand at 72.770 kb on + strand at 72.771 kb on - strand at 72.771 kb on - strand at 72.771 kb on - strand at 72.771 kb on - strand at 72.949 kb on - strand, within H281DRAFT_06059 at 72.949 kb on - strand, within H281DRAFT_06059 at 73.133 kb on + strand, within H281DRAFT_06059 at 73.133 kb on + strand, within H281DRAFT_06059 at 73.134 kb on - strand, within H281DRAFT_06059 at 73.611 kb on + strand, within H281DRAFT_06059 at 73.827 kb on - strand, within H281DRAFT_06059 at 73.832 kb on + strand, within H281DRAFT_06059 at 73.832 kb on + strand, within H281DRAFT_06059 at 73.832 kb on + strand, within H281DRAFT_06059 at 73.832 kb on + strand at 73.832 kb on + strand, within H281DRAFT_06059 at 73.832 kb on + strand, within H281DRAFT_06059 at 73.833 kb on - strand, within H281DRAFT_06059 at 73.835 kb on + strand, within H281DRAFT_06059 at 73.835 kb on + strand, within H281DRAFT_06059 at 73.835 kb on + strand, within H281DRAFT_06059 at 73.836 kb on - strand, within H281DRAFT_06059 at 73.836 kb on - strand, within H281DRAFT_06059 at 73.906 kb on + strand at 73.907 kb on - strand at 74.036 kb on + strand at 74.040 kb on - strand at 74.049 kb on + strand at 74.049 kb on + strand at 74.049 kb on + strand at 74.050 kb on - strand at 74.050 kb on - strand at 74.134 kb on + strand at 74.135 kb on - strand at 74.191 kb on + strand at 74.192 kb on - strand at 74.252 kb on + strand at 74.252 kb on + strand at 74.441 kb on - strand at 74.467 kb on + strand at 74.468 kb on - strand, within H281DRAFT_06060 at 74.554 kb on + strand, within H281DRAFT_06060 at 74.554 kb on + strand, within H281DRAFT_06060 at 74.647 kb on + strand, within H281DRAFT_06060 at 74.648 kb on - strand, within H281DRAFT_06060 at 74.876 kb on - strand, within H281DRAFT_06060
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 71,857 - -1.9 71,857 - +1.4 72,084 + H281DRAFT_06058 0.25 +1.7 72,085 - H281DRAFT_06058 0.25 -0.2 72,198 - H281DRAFT_06058 0.39 -0.1 72,528 - H281DRAFT_06058 0.81 -0.5 72,541 + H281DRAFT_06058 0.83 -1.1 72,541 + +3.1 72,611 + +1.0 72,611 + +0.1 72,612 - -0.7 72,612 - -3.2 72,770 + +0.3 72,770 + -0.0 72,771 - -0.1 72,771 - -0.2 72,771 - +1.0 72,771 - +0.3 72,949 - H281DRAFT_06059 0.13 -4.2 72,949 - H281DRAFT_06059 0.13 -4.0 73,133 + H281DRAFT_06059 0.28 -3.1 73,133 + H281DRAFT_06059 0.28 -2.8 73,134 - H281DRAFT_06059 0.28 -2.8 73,611 + H281DRAFT_06059 0.68 -3.7 73,827 - H281DRAFT_06059 0.86 -4.4 73,832 + H281DRAFT_06059 0.87 -3.1 73,832 + H281DRAFT_06059 0.87 -3.0 73,832 + H281DRAFT_06059 0.87 -2.6 73,832 + -0.0 73,832 + H281DRAFT_06059 0.87 -2.7 73,832 + H281DRAFT_06059 0.87 -0.9 73,833 - H281DRAFT_06059 0.87 -5.4 73,835 + H281DRAFT_06059 0.87 -4.4 73,835 + H281DRAFT_06059 0.87 -2.5 73,835 + H281DRAFT_06059 0.87 -4.9 73,836 - H281DRAFT_06059 0.87 -4.2 73,836 - H281DRAFT_06059 0.87 -2.4 73,906 + -2.9 73,907 - -5.5 74,036 + -1.4 74,040 - -0.7 74,049 + -4.3 74,049 + -0.0 74,049 + -1.7 74,050 - +0.1 74,050 - +0.2 74,134 + -3.3 74,135 - +0.8 74,191 + -2.6 74,192 - +1.0 74,252 + +0.6 74,252 + +0.4 74,441 - -1.3 74,467 + -3.5 74,468 - H281DRAFT_06060 0.10 -1.2 74,554 + H281DRAFT_06060 0.16 -0.0 74,554 + H281DRAFT_06060 0.16 +0.2 74,647 + H281DRAFT_06060 0.22 +0.2 74,648 - H281DRAFT_06060 0.22 -2.7 74,876 - H281DRAFT_06060 0.36 -0.6
Or see this region's nucleotide sequence