Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06030 and H281DRAFT_06031 are separated by 193 nucleotides H281DRAFT_06031 and H281DRAFT_06032 are separated by 171 nucleotides H281DRAFT_06032 and H281DRAFT_06033 are separated by 123 nucleotides
H281DRAFT_06030: H281DRAFT_06030 - hypothetical protein, at 35,305 to 36,114
_06030
H281DRAFT_06031: H281DRAFT_06031 - transcriptional regulator, MarR family, at 36,308 to 36,760
_06031
H281DRAFT_06032: H281DRAFT_06032 - peroxiredoxin, Ohr subfamily, at 36,932 to 37,351
_06032
H281DRAFT_06033: H281DRAFT_06033 - deoxyribodipyrimidine photo-lyase type I, at 37,475 to 38,974
_06033
Position (kb) 36
37
38 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 36.028 kb on + strand, within H281DRAFT_06030 at 36.029 kb on - strand, within H281DRAFT_06030 at 36.040 kb on + strand at 36.040 kb on + strand at 36.041 kb on - strand at 36.049 kb on + strand at 36.049 kb on + strand at 36.099 kb on + strand at 36.120 kb on + strand at 36.207 kb on - strand at 36.217 kb on + strand at 36.217 kb on + strand at 36.218 kb on - strand at 36.218 kb on - strand at 36.226 kb on + strand at 36.274 kb on + strand at 36.365 kb on + strand, within H281DRAFT_06031 at 36.366 kb on - strand, within H281DRAFT_06031 at 36.396 kb on - strand, within H281DRAFT_06031 at 36.429 kb on - strand, within H281DRAFT_06031 at 36.438 kb on - strand, within H281DRAFT_06031 at 36.438 kb on - strand, within H281DRAFT_06031 at 36.600 kb on - strand, within H281DRAFT_06031 at 36.747 kb on - strand at 36.747 kb on - strand at 36.747 kb on - strand at 36.944 kb on + strand at 36.990 kb on + strand, within H281DRAFT_06032 at 36.990 kb on + strand, within H281DRAFT_06032 at 37.265 kb on - strand, within H281DRAFT_06032 at 37.312 kb on + strand at 37.312 kb on + strand at 37.349 kb on + strand at 37.401 kb on + strand at 37.414 kb on + strand at 37.458 kb on + strand at 37.459 kb on - strand at 37.459 kb on - strand at 37.565 kb on + strand at 37.565 kb on + strand at 37.566 kb on - strand at 37.616 kb on - strand at 37.616 kb on - strand at 37.642 kb on + strand, within H281DRAFT_06033 at 37.838 kb on + strand, within H281DRAFT_06033 at 37.988 kb on + strand, within H281DRAFT_06033 at 37.989 kb on - strand, within H281DRAFT_06033 at 38.036 kb on + strand, within H281DRAFT_06033 at 38.052 kb on - strand, within H281DRAFT_06033 at 38.097 kb on + strand, within H281DRAFT_06033 at 38.097 kb on + strand, within H281DRAFT_06033 at 38.213 kb on + strand, within H281DRAFT_06033 at 38.214 kb on - strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.251 kb on + strand, within H281DRAFT_06033 at 38.252 kb on - strand, within H281DRAFT_06033 at 38.252 kb on - strand, within H281DRAFT_06033 at 38.252 kb on - strand, within H281DRAFT_06033 at 38.252 kb on - strand, within H281DRAFT_06033 at 38.255 kb on + strand, within H281DRAFT_06033 at 38.255 kb on + strand, within H281DRAFT_06033 at 38.255 kb on + strand, within H281DRAFT_06033 at 38.256 kb on - strand at 38.256 kb on - strand, within H281DRAFT_06033 at 38.256 kb on - strand, within H281DRAFT_06033 at 38.256 kb on - strand, within H281DRAFT_06033 at 38.286 kb on + strand, within H281DRAFT_06033
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 36,028 + H281DRAFT_06030 0.89 -1.0 36,029 - H281DRAFT_06030 0.89 -1.0 36,040 + +0.3 36,040 + -0.2 36,041 - +0.2 36,049 + +0.3 36,049 + +0.4 36,099 + +1.4 36,120 + +1.7 36,207 - +0.8 36,217 + -0.3 36,217 + -1.4 36,218 - +0.6 36,218 - -0.2 36,226 + -0.4 36,274 + +0.8 36,365 + H281DRAFT_06031 0.13 -1.8 36,366 - H281DRAFT_06031 0.13 -1.3 36,396 - H281DRAFT_06031 0.19 -0.8 36,429 - H281DRAFT_06031 0.27 -1.4 36,438 - H281DRAFT_06031 0.29 -0.7 36,438 - H281DRAFT_06031 0.29 +0.4 36,600 - H281DRAFT_06031 0.64 -0.1 36,747 - -0.7 36,747 - -0.1 36,747 - -0.7 36,944 + +0.1 36,990 + H281DRAFT_06032 0.14 +2.1 36,990 + H281DRAFT_06032 0.14 -0.5 37,265 - H281DRAFT_06032 0.79 +0.2 37,312 + -0.3 37,312 + +1.1 37,349 + -1.0 37,401 + +0.4 37,414 + -0.6 37,458 + +0.1 37,459 - -0.0 37,459 - +0.0 37,565 + +1.0 37,565 + -0.5 37,566 - +0.3 37,616 - -2.1 37,616 - +0.3 37,642 + H281DRAFT_06033 0.11 -1.6 37,838 + H281DRAFT_06033 0.24 +3.3 37,988 + H281DRAFT_06033 0.34 +0.3 37,989 - H281DRAFT_06033 0.34 +0.0 38,036 + H281DRAFT_06033 0.37 +0.6 38,052 - H281DRAFT_06033 0.38 +0.1 38,097 + H281DRAFT_06033 0.41 +0.6 38,097 + H281DRAFT_06033 0.41 +0.0 38,213 + H281DRAFT_06033 0.49 -0.3 38,214 - H281DRAFT_06033 0.49 +0.3 38,251 + H281DRAFT_06033 0.52 +0.3 38,251 + H281DRAFT_06033 0.52 -0.4 38,251 + H281DRAFT_06033 0.52 -0.0 38,251 + H281DRAFT_06033 0.52 +0.3 38,251 + H281DRAFT_06033 0.52 +0.5 38,251 + H281DRAFT_06033 0.52 +0.3 38,251 + H281DRAFT_06033 0.52 -0.8 38,251 + H281DRAFT_06033 0.52 +0.0 38,252 - H281DRAFT_06033 0.52 -1.8 38,252 - H281DRAFT_06033 0.52 -0.1 38,252 - H281DRAFT_06033 0.52 -0.5 38,252 - H281DRAFT_06033 0.52 +0.1 38,255 + H281DRAFT_06033 0.52 +0.1 38,255 + H281DRAFT_06033 0.52 +1.1 38,255 + H281DRAFT_06033 0.52 +0.1 38,256 - +0.2 38,256 - H281DRAFT_06033 0.52 -0.5 38,256 - H281DRAFT_06033 0.52 +0.2 38,256 - H281DRAFT_06033 0.52 +0.3 38,286 + H281DRAFT_06033 0.54 +1.0
Or see this region's nucleotide sequence