Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06020 and H281DRAFT_06021 are separated by 88 nucleotides H281DRAFT_06021 and H281DRAFT_06022 are separated by 155 nucleotides
H281DRAFT_06020: H281DRAFT_06020 - carboxymethylenebutenolidase, at 23,790 to 24,662
_06020
H281DRAFT_06021: H281DRAFT_06021 - NADH dehydrogenase, at 24,751 to 26,097
_06021
H281DRAFT_06022: H281DRAFT_06022 - DNA polymerase I, at 26,253 to 28,994
_06022
Position (kb) 24
25
26
27 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 23.860 kb on + strand at 23.861 kb on - strand at 23.906 kb on - strand, within H281DRAFT_06020 at 23.932 kb on - strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.066 kb on - strand, within H281DRAFT_06020 at 24.097 kb on + strand, within H281DRAFT_06020 at 24.355 kb on + strand, within H281DRAFT_06020 at 24.392 kb on + strand, within H281DRAFT_06020 at 24.393 kb on - strand, within H281DRAFT_06020 at 24.428 kb on + strand, within H281DRAFT_06020 at 24.699 kb on + strand at 24.699 kb on + strand at 24.773 kb on - strand at 24.832 kb on + strand at 24.833 kb on - strand at 24.843 kb on + strand at 24.843 kb on + strand at 24.843 kb on + strand at 24.844 kb on - strand at 24.844 kb on - strand at 24.866 kb on + strand at 24.866 kb on + strand at 24.866 kb on + strand at 24.867 kb on - strand at 24.867 kb on - strand at 24.867 kb on - strand at 24.867 kb on - strand at 24.900 kb on + strand, within H281DRAFT_06021 at 25.219 kb on - strand, within H281DRAFT_06021 at 25.754 kb on + strand, within H281DRAFT_06021 at 25.923 kb on + strand, within H281DRAFT_06021 at 26.027 kb on + strand at 26.086 kb on - strand at 26.110 kb on - strand at 26.110 kb on - strand at 26.203 kb on + strand at 26.204 kb on - strand at 26.209 kb on + strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.210 kb on - strand at 26.489 kb on + strand at 26.599 kb on + strand, within H281DRAFT_06022 at 26.600 kb on - strand, within H281DRAFT_06022 at 26.639 kb on - strand, within H281DRAFT_06022 at 26.681 kb on - strand, within H281DRAFT_06022 at 26.681 kb on - strand, within H281DRAFT_06022
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 23,860 + +0.3 23,861 - +1.0 23,906 - H281DRAFT_06020 0.13 -0.2 23,932 - H281DRAFT_06020 0.16 -1.0 24,065 + H281DRAFT_06020 0.32 +1.2 24,065 + H281DRAFT_06020 0.32 +0.0 24,065 + H281DRAFT_06020 0.32 -0.0 24,065 + H281DRAFT_06020 0.32 +0.4 24,066 - H281DRAFT_06020 0.32 -1.4 24,097 + H281DRAFT_06020 0.35 -0.0 24,355 + H281DRAFT_06020 0.65 +0.6 24,392 + H281DRAFT_06020 0.69 +0.4 24,393 - H281DRAFT_06020 0.69 +0.2 24,428 + H281DRAFT_06020 0.73 +1.0 24,699 + +1.2 24,699 + +3.3 24,773 - +1.7 24,832 + -0.7 24,833 - +0.1 24,843 + -0.2 24,843 + +0.3 24,843 + -0.0 24,844 - -0.3 24,844 - -1.0 24,866 + -0.3 24,866 + -0.0 24,866 + -0.6 24,867 - -0.2 24,867 - -0.2 24,867 - +0.0 24,867 - -0.1 24,900 + H281DRAFT_06021 0.11 -0.6 25,219 - H281DRAFT_06021 0.35 +0.4 25,754 + H281DRAFT_06021 0.74 +1.2 25,923 + H281DRAFT_06021 0.87 -0.5 26,027 + +0.2 26,086 - -1.6 26,110 - +0.6 26,110 - -0.5 26,203 + +0.6 26,204 - -1.5 26,209 + +0.2 26,210 - +0.3 26,210 - +0.2 26,210 - -0.5 26,210 - -0.1 26,210 - +0.3 26,210 - +1.6 26,489 + -0.0 26,599 + H281DRAFT_06022 0.13 +1.3 26,600 - H281DRAFT_06022 0.13 -2.1 26,639 - H281DRAFT_06022 0.14 -1.9 26,681 - H281DRAFT_06022 0.16 -1.6 26,681 - H281DRAFT_06022 0.16 -2.5
Or see this region's nucleotide sequence