Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06007 and H281DRAFT_06008 are separated by 632 nucleotides H281DRAFT_06008 and H281DRAFT_06009 are separated by 269 nucleotides
H281DRAFT_06007: H281DRAFT_06007 - amino acid ABC transporter substrate-binding protein, PAAT family, at 7,629 to 8,360
_06007
H281DRAFT_06008: H281DRAFT_06008 - RNA polymerase, sigma 70 subunit, RpoD, at 8,993 to 11,227
_06008
H281DRAFT_06009: H281DRAFT_06009 - DNA primase, at 11,497 to 13,365
_06009
Position (kb)
8
9
10
11
12 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 8.053 kb on + strand, within H281DRAFT_06007 at 8.053 kb on + strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.054 kb on - strand, within H281DRAFT_06007 at 8.193 kb on + strand, within H281DRAFT_06007 at 8.193 kb on + strand, within H281DRAFT_06007 at 8.194 kb on - strand, within H281DRAFT_06007 at 8.220 kb on - strand, within H281DRAFT_06007 at 8.402 kb on + strand at 8.403 kb on - strand at 8.836 kb on - strand at 8.853 kb on + strand at 8.853 kb on + strand at 8.853 kb on + strand at 8.854 kb on - strand at 8.854 kb on - strand at 8.893 kb on + strand at 8.894 kb on - strand at 8.894 kb on - strand at 8.894 kb on - strand at 8.896 kb on + strand at 8.896 kb on + strand at 8.964 kb on + strand at 8.965 kb on - strand at 8.965 kb on - strand at 8.968 kb on + strand at 8.969 kb on - strand at 8.969 kb on - strand at 8.975 kb on + strand at 8.976 kb on - strand at 8.976 kb on - strand at 9.262 kb on + strand, within H281DRAFT_06008 at 9.263 kb on - strand, within H281DRAFT_06008 at 9.485 kb on - strand, within H281DRAFT_06008 at 9.565 kb on - strand, within H281DRAFT_06008 at 9.657 kb on + strand, within H281DRAFT_06008 at 9.658 kb on - strand, within H281DRAFT_06008 at 9.861 kb on + strand, within H281DRAFT_06008 at 9.971 kb on - strand, within H281DRAFT_06008 at 9.971 kb on - strand, within H281DRAFT_06008 at 10.119 kb on + strand, within H281DRAFT_06008 at 10.120 kb on - strand, within H281DRAFT_06008 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand, within H281DRAFT_06008 at 10.551 kb on + strand at 10.551 kb on + strand, within H281DRAFT_06008 at 10.698 kb on + strand, within H281DRAFT_06008 at 10.699 kb on - strand, within H281DRAFT_06008 at 11.013 kb on - strand at 11.103 kb on - strand at 11.192 kb on + strand at 11.287 kb on + strand at 11.287 kb on + strand at 11.287 kb on + strand at 11.325 kb on - strand at 11.392 kb on + strand at 11.467 kb on - strand at 11.470 kb on - strand at 11.471 kb on + strand at 11.471 kb on + strand at 11.472 kb on - strand at 11.498 kb on + strand at 11.498 kb on + strand at 11.499 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 8,053 + H281DRAFT_06007 0.58 +0.4 8,053 + H281DRAFT_06007 0.58 +0.1 8,054 - H281DRAFT_06007 0.58 -1.3 8,054 - H281DRAFT_06007 0.58 +0.2 8,054 - H281DRAFT_06007 0.58 -0.3 8,054 - H281DRAFT_06007 0.58 +0.1 8,193 + H281DRAFT_06007 0.77 -0.1 8,193 + H281DRAFT_06007 0.77 -0.9 8,194 - H281DRAFT_06007 0.77 +1.3 8,220 - H281DRAFT_06007 0.81 +0.1 8,402 + -2.4 8,403 - +1.4 8,836 - -0.5 8,853 + +0.7 8,853 + +0.3 8,853 + +1.0 8,854 - -0.0 8,854 - +0.6 8,893 + -0.2 8,894 - -0.4 8,894 - +0.4 8,894 - +0.6 8,896 + -1.2 8,896 + -0.1 8,964 + +0.7 8,965 - +0.9 8,965 - -0.9 8,968 + -0.3 8,969 - -0.3 8,969 - +0.2 8,975 + +0.3 8,976 - -0.2 8,976 - -0.1 9,262 + H281DRAFT_06008 0.12 -3.2 9,263 - H281DRAFT_06008 0.12 -3.7 9,485 - H281DRAFT_06008 0.22 -3.8 9,565 - H281DRAFT_06008 0.26 -0.4 9,657 + H281DRAFT_06008 0.30 -2.7 9,658 - H281DRAFT_06008 0.30 -0.6 9,861 + H281DRAFT_06008 0.39 -4.1 9,971 - H281DRAFT_06008 0.44 -2.9 9,971 - H281DRAFT_06008 0.44 -4.6 10,119 + H281DRAFT_06008 0.50 -1.8 10,120 - H281DRAFT_06008 0.50 -3.1 10,551 + H281DRAFT_06008 0.70 -2.9 10,551 + H281DRAFT_06008 0.70 -3.9 10,551 + H281DRAFT_06008 0.70 -2.6 10,551 + -0.0 10,551 + H281DRAFT_06008 0.70 -3.6 10,698 + H281DRAFT_06008 0.76 -2.1 10,699 - H281DRAFT_06008 0.76 -1.9 11,013 - +0.4 11,103 - -3.1 11,192 + -0.4 11,287 + -4.3 11,287 + -0.2 11,287 + -3.8 11,325 - +1.0 11,392 + -2.4 11,467 - -0.4 11,470 - +1.1 11,471 + -1.3 11,471 + -2.9 11,472 - +1.3 11,498 + -2.4 11,498 + -3.0 11,499 - +0.3
Or see this region's nucleotide sequence