Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05956

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05955 and H281DRAFT_05956 overlap by 4 nucleotidesH281DRAFT_05956 and H281DRAFT_05957 overlap by 4 nucleotides H281DRAFT_05955: H281DRAFT_05955 - Predicted arabinose efflux permease, MFS family, at 95,503 to 96,741 _05955 H281DRAFT_05956: H281DRAFT_05956 - Predicted arabinose efflux permease, MFS family, at 96,738 to 98,018 _05956 H281DRAFT_05957: H281DRAFT_05957 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 98,015 to 99,010 _05957 Position (kb) 96 97 98 99Strain fitness (log2 ratio) -1 0 1at 96.008 kb on + strand, within H281DRAFT_05955at 96.081 kb on - strand, within H281DRAFT_05955at 96.266 kb on + strand, within H281DRAFT_05955at 96.267 kb on - strand, within H281DRAFT_05955at 96.669 kb on - strandat 97.052 kb on - strand, within H281DRAFT_05956at 97.259 kb on - strand, within H281DRAFT_05956at 98.047 kb on - strandat 98.476 kb on - strand, within H281DRAFT_05957

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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96,008 + H281DRAFT_05955 0.41 -0.9
96,081 - H281DRAFT_05955 0.47 -0.0
96,266 + H281DRAFT_05955 0.62 +0.3
96,267 - H281DRAFT_05955 0.62 -0.9
96,669 - +0.2
97,052 - H281DRAFT_05956 0.25 +0.9
97,259 - H281DRAFT_05956 0.41 +0.7
98,047 - +0.8
98,476 - H281DRAFT_05957 0.46 +0.8

Or see this region's nucleotide sequence