Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05900 and H281DRAFT_05901 are separated by 29 nucleotides H281DRAFT_05901 and H281DRAFT_05902 are separated by 151 nucleotides H281DRAFT_05902 and H281DRAFT_05903 are separated by 129 nucleotides H281DRAFT_05903 and H281DRAFT_05904 are separated by 265 nucleotides
H281DRAFT_05900: H281DRAFT_05900 - HD-GYP domain, at 36,414 to 37,904
_05900
H281DRAFT_05901: H281DRAFT_05901 - Cupin domain-containing protein, at 37,934 to 38,275
_05901
H281DRAFT_05902: H281DRAFT_05902 - 2-Methylisocitrate lyase, PEP mutase family, at 38,427 to 39,275
_05902
H281DRAFT_05903: H281DRAFT_05903 - osmotically inducible protein OsmC, at 39,405 to 39,830
_05903
H281DRAFT_05904: H281DRAFT_05904 - transcriptional regulator, RpiR family, at 40,096 to 40,950
_05904
Position (kb) 38
39
40 Strain fitness (log2 ratio) -1
0
1
2 at 37.522 kb on + strand, within H281DRAFT_05900 at 37.523 kb on - strand, within H281DRAFT_05900 at 37.523 kb on - strand, within H281DRAFT_05900 at 37.993 kb on - strand, within H281DRAFT_05901 at 37.993 kb on - strand at 38.123 kb on + strand, within H281DRAFT_05901 at 38.123 kb on + strand, within H281DRAFT_05901 at 38.530 kb on - strand, within H281DRAFT_05902 at 39.736 kb on + strand at 39.737 kb on - strand, within H281DRAFT_05903
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 37,522 + H281DRAFT_05900 0.74 +0.5 37,523 - H281DRAFT_05900 0.74 -1.2 37,523 - H281DRAFT_05900 0.74 +0.5 37,993 - H281DRAFT_05901 0.17 -0.7 37,993 - +0.8 38,123 + H281DRAFT_05901 0.55 +1.5 38,123 + H281DRAFT_05901 0.55 +1.8 38,530 - H281DRAFT_05902 0.12 -0.9 39,736 + +0.2 39,737 - H281DRAFT_05903 0.78 +0.3
Or see this region's nucleotide sequence