Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05897 and H281DRAFT_05898 are separated by 107 nucleotides H281DRAFT_05898 and H281DRAFT_05899 are separated by 77 nucleotides H281DRAFT_05899 and H281DRAFT_05900 are separated by 154 nucleotides
H281DRAFT_05897: H281DRAFT_05897 - transcriptional regulator, AraC family, at 33,790 to 34,884
_05897
H281DRAFT_05898: H281DRAFT_05898 - Short repeat of unknown function (DUF308), at 34,992 to 35,567
_05898
H281DRAFT_05899: H281DRAFT_05899 - hypothetical protein, at 35,645 to 36,259
_05899
H281DRAFT_05900: H281DRAFT_05900 - HD-GYP domain, at 36,414 to 37,904
_05900
Position (kb) 35
36
37 Strain fitness (log2 ratio) -1
0
1 at 35.050 kb on + strand, within H281DRAFT_05898 at 35.051 kb on - strand, within H281DRAFT_05898 at 35.051 kb on - strand, within H281DRAFT_05898 at 35.128 kb on + strand, within H281DRAFT_05898 at 35.384 kb on - strand, within H281DRAFT_05898 at 35.421 kb on + strand, within H281DRAFT_05898 at 35.541 kb on - strand at 35.620 kb on + strand at 35.621 kb on - strand at 35.624 kb on + strand at 35.697 kb on + strand at 35.698 kb on - strand at 35.829 kb on + strand, within H281DRAFT_05899 at 35.923 kb on - strand, within H281DRAFT_05899 at 36.021 kb on + strand, within H281DRAFT_05899 at 36.022 kb on - strand, within H281DRAFT_05899 at 36.263 kb on + strand at 36.264 kb on - strand at 36.274 kb on + strand at 36.275 kb on - strand at 36.294 kb on + strand at 36.295 kb on - strand at 36.382 kb on - strand at 36.382 kb on - strand at 36.461 kb on - strand at 36.919 kb on - strand, within H281DRAFT_05900 at 36.919 kb on - strand, within H281DRAFT_05900 at 36.923 kb on - strand, within H281DRAFT_05900 at 36.923 kb on - strand, within H281DRAFT_05900 at 36.963 kb on + strand, within H281DRAFT_05900 at 36.964 kb on - strand, within H281DRAFT_05900
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 35,050 + H281DRAFT_05898 0.10 +0.2 35,051 - H281DRAFT_05898 0.10 +0.3 35,051 - H281DRAFT_05898 0.10 -0.6 35,128 + H281DRAFT_05898 0.24 +0.4 35,384 - H281DRAFT_05898 0.68 -0.0 35,421 + H281DRAFT_05898 0.74 +0.7 35,541 - -0.3 35,620 + +0.5 35,621 - -0.3 35,624 + -0.6 35,697 + +0.6 35,698 - -0.2 35,829 + H281DRAFT_05899 0.30 +0.4 35,923 - H281DRAFT_05899 0.45 +0.1 36,021 + H281DRAFT_05899 0.61 -0.6 36,022 - H281DRAFT_05899 0.61 +0.0 36,263 + +0.9 36,264 - +0.2 36,274 + +0.1 36,275 - +0.3 36,294 + -1.7 36,295 - -0.5 36,382 - -0.3 36,382 - +0.3 36,461 - +0.2 36,919 - H281DRAFT_05900 0.34 +0.5 36,919 - H281DRAFT_05900 0.34 +0.7 36,923 - H281DRAFT_05900 0.34 +0.8 36,923 - H281DRAFT_05900 0.34 -0.4 36,963 + H281DRAFT_05900 0.37 +0.4 36,964 - H281DRAFT_05900 0.37 -0.5
Or see this region's nucleotide sequence