Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05666 and H281DRAFT_05667 are separated by 194 nucleotides H281DRAFT_05667 and H281DRAFT_05668 are separated by 19 nucleotides H281DRAFT_05668 and H281DRAFT_05669 are separated by 153 nucleotides
H281DRAFT_05666: H281DRAFT_05666 - Sec-independent protein translocase TatC, at 83,380 to 84,159
_05666
H281DRAFT_05667: H281DRAFT_05667 - serine protease DegQ, at 84,354 to 85,568
_05667
H281DRAFT_05668: H281DRAFT_05668 - dinuclear metal center protein, YbgI/SA1388 family, at 85,588 to 86,334
_05668
H281DRAFT_05669: H281DRAFT_05669 - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 86,488 to 87,186
_05669
Position (kb) 84
85
86 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 83.365 kb on + strand at 84.236 kb on + strand at 84.254 kb on + strand at 84.332 kb on + strand at 84.607 kb on - strand, within H281DRAFT_05667 at 84.800 kb on - strand, within H281DRAFT_05667 at 84.905 kb on + strand, within H281DRAFT_05667 at 84.905 kb on + strand, within H281DRAFT_05667 at 84.905 kb on + strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.906 kb on - strand, within H281DRAFT_05667 at 84.981 kb on - strand, within H281DRAFT_05667 at 85.180 kb on - strand, within H281DRAFT_05667 at 85.186 kb on + strand, within H281DRAFT_05667 at 85.203 kb on + strand, within H281DRAFT_05667 at 85.203 kb on + strand, within H281DRAFT_05667 at 85.378 kb on + strand, within H281DRAFT_05667 at 85.378 kb on + strand, within H281DRAFT_05667 at 85.378 kb on + strand, within H281DRAFT_05667 at 85.379 kb on - strand at 85.379 kb on - strand, within H281DRAFT_05667 at 85.379 kb on - strand, within H281DRAFT_05667 at 85.379 kb on - strand, within H281DRAFT_05667 at 85.385 kb on + strand, within H281DRAFT_05667 at 85.385 kb on + strand, within H281DRAFT_05667 at 85.385 kb on + strand, within H281DRAFT_05667 at 85.562 kb on + strand at 85.563 kb on - strand at 85.585 kb on + strand at 85.585 kb on + strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.586 kb on - strand at 85.587 kb on + strand at 85.587 kb on + strand at 85.588 kb on - strand at 85.612 kb on + strand at 85.651 kb on + strand at 85.651 kb on + strand at 85.651 kb on + strand at 85.652 kb on - strand at 85.652 kb on - strand at 85.784 kb on - strand, within H281DRAFT_05668 at 85.922 kb on + strand, within H281DRAFT_05668 at 85.922 kb on + strand, within H281DRAFT_05668 at 85.923 kb on - strand at 86.158 kb on + strand, within H281DRAFT_05668 at 86.158 kb on + strand, within H281DRAFT_05668 at 86.174 kb on + strand, within H281DRAFT_05668 at 86.310 kb on + strand at 86.360 kb on + strand at 86.360 kb on + strand at 86.360 kb on + strand at 86.360 kb on + strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.361 kb on - strand at 86.364 kb on + strand at 86.397 kb on + strand at 86.511 kb on + strand at 86.511 kb on + strand at 86.511 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 83,365 + -1.2 84,236 + -0.4 84,254 + +0.1 84,332 + -0.3 84,607 - H281DRAFT_05667 0.21 -0.6 84,800 - H281DRAFT_05667 0.37 -1.5 84,905 + H281DRAFT_05667 0.45 -1.8 84,905 + H281DRAFT_05667 0.45 -0.5 84,905 + H281DRAFT_05667 0.45 +2.1 84,906 - H281DRAFT_05667 0.45 -0.1 84,906 - H281DRAFT_05667 0.45 -3.1 84,906 - H281DRAFT_05667 0.45 -3.4 84,906 - H281DRAFT_05667 0.45 -1.3 84,906 - H281DRAFT_05667 0.45 +0.5 84,981 - H281DRAFT_05667 0.52 -2.2 85,180 - H281DRAFT_05667 0.68 -1.2 85,186 + H281DRAFT_05667 0.68 -0.7 85,203 + H281DRAFT_05667 0.70 -0.6 85,203 + H281DRAFT_05667 0.70 -3.8 85,378 + H281DRAFT_05667 0.84 +0.2 85,378 + H281DRAFT_05667 0.84 -0.5 85,378 + H281DRAFT_05667 0.84 -2.0 85,379 - -0.5 85,379 - H281DRAFT_05667 0.84 -0.7 85,379 - H281DRAFT_05667 0.84 -0.9 85,379 - H281DRAFT_05667 0.84 +0.3 85,385 + H281DRAFT_05667 0.85 -3.7 85,385 + H281DRAFT_05667 0.85 -0.8 85,385 + H281DRAFT_05667 0.85 -1.0 85,562 + -1.0 85,563 - -0.8 85,585 + -0.3 85,585 + -3.7 85,586 - -0.1 85,586 - +0.6 85,586 - +0.3 85,586 - +0.8 85,586 - +1.0 85,586 - -0.4 85,586 - -1.3 85,586 - +0.9 85,587 + -0.4 85,587 + -1.6 85,588 - +0.4 85,612 + -0.3 85,651 + +1.1 85,651 + -0.5 85,651 + -0.2 85,652 - +0.8 85,652 - +0.5 85,784 - H281DRAFT_05668 0.26 +0.9 85,922 + H281DRAFT_05668 0.45 -0.0 85,922 + H281DRAFT_05668 0.45 -0.2 85,923 - +1.1 86,158 + H281DRAFT_05668 0.76 +1.3 86,158 + H281DRAFT_05668 0.76 +0.2 86,174 + H281DRAFT_05668 0.78 +0.6 86,310 + +1.5 86,360 + +0.5 86,360 + -0.6 86,360 + +0.4 86,360 + -1.9 86,361 - -0.6 86,361 - +0.9 86,361 - +0.6 86,361 - +0.9 86,361 - +0.3 86,361 - +1.7 86,361 - -0.5 86,364 + +0.8 86,397 + -0.2 86,511 + -0.1 86,511 + +3.4 86,511 + +2.8
Or see this region's nucleotide sequence