Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05534 and H281DRAFT_05535 overlap by 7 nucleotides H281DRAFT_05535 and H281DRAFT_05536 are separated by 8 nucleotides H281DRAFT_05536 and H281DRAFT_05537 overlap by 4 nucleotides
H281DRAFT_05534: H281DRAFT_05534 - Zn-dependent dipeptidase, dipeptidase homolog, at 118,847 to 119,812
_05534
H281DRAFT_05535: H281DRAFT_05535 - YD repeat-containing protein, at 119,806 to 120,549
_05535
H281DRAFT_05536: H281DRAFT_05536 - hypothetical protein, at 120,558 to 122,282
_05536
H281DRAFT_05537: H281DRAFT_05537 - transcriptional regulator, IclR family, at 122,279 to 123,001
_05537
Position (kb) 120
121
122
123 Strain fitness (log2 ratio) -1
0
1
2 at 119.641 kb on + strand, within H281DRAFT_05534 at 119.873 kb on + strand at 119.970 kb on - strand, within H281DRAFT_05535 at 120.147 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.301 kb on - strand, within H281DRAFT_05535 at 120.505 kb on + strand at 120.721 kb on - strand at 120.985 kb on + strand, within H281DRAFT_05536 at 120.986 kb on - strand, within H281DRAFT_05536 at 121.293 kb on + strand, within H281DRAFT_05536 at 121.753 kb on + strand, within H281DRAFT_05536 at 121.754 kb on - strand, within H281DRAFT_05536 at 122.562 kb on + strand, within H281DRAFT_05537 at 123.001 kb on + strand at 123.002 kb on - strand at 123.053 kb on - strand at 123.059 kb on + strand at 123.060 kb on - strand at 123.060 kb on - strand at 123.241 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 119,641 + H281DRAFT_05534 0.82 +0.6 119,873 + -0.9 119,970 - H281DRAFT_05535 0.22 -0.0 120,147 - H281DRAFT_05535 0.46 -0.1 120,301 - H281DRAFT_05535 0.67 -0.5 120,301 - H281DRAFT_05535 0.67 -1.3 120,505 + +0.1 120,721 - +1.8 120,985 + H281DRAFT_05536 0.25 -1.1 120,986 - H281DRAFT_05536 0.25 +0.6 121,293 + H281DRAFT_05536 0.43 +0.4 121,753 + H281DRAFT_05536 0.69 +0.7 121,754 - H281DRAFT_05536 0.69 +1.5 122,562 + H281DRAFT_05537 0.39 +0.2 123,001 + +0.6 123,002 - -0.2 123,053 - -0.1 123,059 + +0.2 123,060 - +1.5 123,060 - +0.4 123,241 - +0.1
Or see this region's nucleotide sequence