Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05471 and H281DRAFT_05472 are separated by 13 nucleotides H281DRAFT_05472 and H281DRAFT_05473 are separated by 24 nucleotides H281DRAFT_05473 and H281DRAFT_05474 overlap by 4 nucleotides
H281DRAFT_05471: H281DRAFT_05471 - pyruvate dehydrogenase (quinone), at 51,341 to 53,137
_05471
H281DRAFT_05472: H281DRAFT_05472 - L-alanine-DL-glutamate epimerase, at 53,151 to 54,257
_05472
H281DRAFT_05473: H281DRAFT_05473 - hypothetical protein, at 54,282 to 55,199
_05473
H281DRAFT_05474: H281DRAFT_05474 - Gluconate 2-dehydrogenase subunit 3, at 55,196 to 55,843
_05474
Position (kb) 53
54
55 Strain fitness (log2 ratio) -1
0
1
2 at 52.718 kb on + strand, within H281DRAFT_05471 at 52.896 kb on - strand, within H281DRAFT_05471 at 52.896 kb on - strand, within H281DRAFT_05471 at 52.896 kb on - strand, within H281DRAFT_05471 at 52.896 kb on - strand, within H281DRAFT_05471 at 53.135 kb on + strand at 53.241 kb on + strand at 53.242 kb on - strand at 53.242 kb on - strand at 53.313 kb on + strand, within H281DRAFT_05472 at 53.314 kb on - strand, within H281DRAFT_05472 at 53.314 kb on - strand, within H281DRAFT_05472 at 54.030 kb on + strand, within H281DRAFT_05472 at 54.130 kb on + strand, within H281DRAFT_05472 at 54.130 kb on + strand, within H281DRAFT_05472 at 54.130 kb on + strand, within H281DRAFT_05472 at 54.504 kb on + strand, within H281DRAFT_05473 at 54.505 kb on - strand, within H281DRAFT_05473 at 54.505 kb on - strand, within H281DRAFT_05473 at 54.648 kb on + strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.649 kb on - strand, within H281DRAFT_05473 at 54.912 kb on + strand, within H281DRAFT_05473 at 54.913 kb on - strand, within H281DRAFT_05473
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 52,718 + H281DRAFT_05471 0.77 -0.2 52,896 - H281DRAFT_05471 0.87 +0.9 52,896 - H281DRAFT_05471 0.87 -0.7 52,896 - H281DRAFT_05471 0.87 -0.9 52,896 - H281DRAFT_05471 0.87 -1.3 53,135 + -0.2 53,241 + +1.9 53,242 - -1.2 53,242 - +0.7 53,313 + H281DRAFT_05472 0.15 +0.3 53,314 - H281DRAFT_05472 0.15 +0.4 53,314 - H281DRAFT_05472 0.15 -0.7 54,030 + H281DRAFT_05472 0.79 -0.0 54,130 + H281DRAFT_05472 0.88 -0.5 54,130 + H281DRAFT_05472 0.88 +0.4 54,130 + H281DRAFT_05472 0.88 +0.0 54,504 + H281DRAFT_05473 0.24 -0.0 54,505 - H281DRAFT_05473 0.24 +0.2 54,505 - H281DRAFT_05473 0.24 +0.5 54,648 + H281DRAFT_05473 0.40 +0.5 54,649 - H281DRAFT_05473 0.40 +0.3 54,649 - H281DRAFT_05473 0.40 -0.9 54,649 - H281DRAFT_05473 0.40 +0.7 54,649 - H281DRAFT_05473 0.40 +0.7 54,912 + H281DRAFT_05473 0.69 +0.7 54,913 - H281DRAFT_05473 0.69 +0.8
Or see this region's nucleotide sequence