Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05401 and H281DRAFT_05402 are separated by 94 nucleotides H281DRAFT_05402 and H281DRAFT_05403 are separated by 2 nucleotides H281DRAFT_05403 and H281DRAFT_05404 are separated by 40 nucleotides H281DRAFT_05404 and H281DRAFT_05405 are separated by 53 nucleotides
H281DRAFT_05401: H281DRAFT_05401 - Cytochrome c, mono- and diheme variants, at 164,590 to 165,885
_05401
H281DRAFT_05402: H281DRAFT_05402 - amino acid ABC transporter membrane protein 2, PAAT family, at 165,980 to 166,636
_05402
H281DRAFT_05403: H281DRAFT_05403 - amino acid ABC transporter membrane protein 1, PAAT family, at 166,639 to 167,385
_05403
H281DRAFT_05404: H281DRAFT_05404 - amino acid ABC transporter substrate-binding protein, PAAT family, at 167,426 to 168,262
_05404
H281DRAFT_05405: H281DRAFT_05405 - putative spermidine/putrescine transport system ATP-binding protein, at 168,316 to 169,392
_05405
Position (kb) 166
167
168 Strain fitness (log2 ratio) -1
0
1
2 at 165.752 kb on - strand, within H281DRAFT_05401 at 165.816 kb on + strand at 165.890 kb on - strand at 166.057 kb on - strand, within H281DRAFT_05402 at 166.077 kb on + strand, within H281DRAFT_05402 at 166.237 kb on + strand, within H281DRAFT_05402 at 166.238 kb on - strand, within H281DRAFT_05402 at 166.239 kb on + strand, within H281DRAFT_05402 at 166.239 kb on + strand, within H281DRAFT_05402 at 166.239 kb on + strand, within H281DRAFT_05402 at 166.339 kb on - strand, within H281DRAFT_05402 at 166.470 kb on + strand, within H281DRAFT_05402 at 166.470 kb on + strand, within H281DRAFT_05402 at 166.815 kb on - strand, within H281DRAFT_05403 at 166.863 kb on - strand, within H281DRAFT_05403 at 167.076 kb on - strand, within H281DRAFT_05403 at 167.116 kb on + strand, within H281DRAFT_05403 at 167.208 kb on - strand, within H281DRAFT_05403 at 167.378 kb on + strand at 167.378 kb on + strand at 167.379 kb on - strand at 167.379 kb on - strand at 167.379 kb on - strand at 167.661 kb on - strand, within H281DRAFT_05404 at 167.850 kb on + strand, within H281DRAFT_05404 at 168.031 kb on - strand, within H281DRAFT_05404 at 168.247 kb on + strand at 168.305 kb on + strand at 168.314 kb on + strand at 168.315 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 165,752 - H281DRAFT_05401 0.90 +0.2 165,816 + +0.4 165,890 - -0.1 166,057 - H281DRAFT_05402 0.12 -0.6 166,077 + H281DRAFT_05402 0.15 -0.4 166,237 + H281DRAFT_05402 0.39 +0.2 166,238 - H281DRAFT_05402 0.39 +0.4 166,239 + H281DRAFT_05402 0.39 +1.0 166,239 + H281DRAFT_05402 0.39 +1.1 166,239 + H281DRAFT_05402 0.39 +0.7 166,339 - H281DRAFT_05402 0.55 +0.4 166,470 + H281DRAFT_05402 0.75 -0.6 166,470 + H281DRAFT_05402 0.75 +0.3 166,815 - H281DRAFT_05403 0.24 +2.4 166,863 - H281DRAFT_05403 0.30 +0.3 167,076 - H281DRAFT_05403 0.59 +0.8 167,116 + H281DRAFT_05403 0.64 -0.2 167,208 - H281DRAFT_05403 0.76 -0.2 167,378 + -0.3 167,378 + -1.3 167,379 - -0.4 167,379 - +1.6 167,379 - -1.2 167,661 - H281DRAFT_05404 0.28 +0.8 167,850 + H281DRAFT_05404 0.51 +0.0 168,031 - H281DRAFT_05404 0.72 +0.1 168,247 + -0.6 168,305 + -1.1 168,314 + +0.7 168,315 - +1.1
Or see this region's nucleotide sequence