Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05298 and H281DRAFT_05299 are separated by 19 nucleotides H281DRAFT_05299 and H281DRAFT_05300 are separated by 90 nucleotides H281DRAFT_05300 and H281DRAFT_05301 are separated by 226 nucleotides
H281DRAFT_05298: H281DRAFT_05298 - amino acid ABC transporter membrane protein 2, PAAT family, at 41,066 to 41,728
_05298
H281DRAFT_05299: H281DRAFT_05299 - amino acid ABC transporter membrane protein 1, PAAT family, at 41,748 to 42,398
_05299
H281DRAFT_05300: H281DRAFT_05300 - amino acid ABC transporter substrate-binding protein, PAAT family, at 42,489 to 43,316
_05300
H281DRAFT_05301: H281DRAFT_05301 - Isopenicillin N synthase, at 43,543 to 44,517
_05301
Position (kb) 42
43
44 Strain fitness (log2 ratio) -2
-1
0
1
2 at 41.553 kb on + strand, within H281DRAFT_05298 at 41.728 kb on + strand at 41.729 kb on - strand at 41.816 kb on - strand, within H281DRAFT_05299 at 41.854 kb on + strand at 41.854 kb on + strand, within H281DRAFT_05299 at 41.855 kb on - strand, within H281DRAFT_05299 at 42.046 kb on - strand, within H281DRAFT_05299 at 42.046 kb on - strand, within H281DRAFT_05299 at 42.046 kb on - strand, within H281DRAFT_05299 at 42.097 kb on + strand, within H281DRAFT_05299 at 42.097 kb on + strand, within H281DRAFT_05299 at 42.098 kb on - strand, within H281DRAFT_05299 at 42.176 kb on - strand, within H281DRAFT_05299 at 42.229 kb on + strand, within H281DRAFT_05299 at 42.468 kb on + strand at 42.719 kb on - strand, within H281DRAFT_05300 at 42.839 kb on - strand, within H281DRAFT_05300 at 42.839 kb on - strand, within H281DRAFT_05300 at 42.976 kb on + strand, within H281DRAFT_05300 at 42.977 kb on - strand, within H281DRAFT_05300 at 43.382 kb on - strand at 43.383 kb on + strand at 43.383 kb on + strand at 43.384 kb on - strand at 43.385 kb on + strand at 43.439 kb on - strand at 43.484 kb on + strand at 43.484 kb on + strand at 43.660 kb on + strand, within H281DRAFT_05301 at 43.660 kb on + strand, within H281DRAFT_05301 at 43.961 kb on - strand, within H281DRAFT_05301 at 43.963 kb on + strand, within H281DRAFT_05301 at 44.215 kb on - strand, within H281DRAFT_05301 at 44.215 kb on - strand, within H281DRAFT_05301
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 41,553 + H281DRAFT_05298 0.73 -0.7 41,728 + -2.4 41,729 - +2.5 41,816 - H281DRAFT_05299 0.10 +1.1 41,854 + +1.7 41,854 + H281DRAFT_05299 0.16 +0.5 41,855 - H281DRAFT_05299 0.16 -0.8 42,046 - H281DRAFT_05299 0.46 +0.2 42,046 - H281DRAFT_05299 0.46 +0.0 42,046 - H281DRAFT_05299 0.46 +1.2 42,097 + H281DRAFT_05299 0.54 -0.9 42,097 + H281DRAFT_05299 0.54 -2.2 42,098 - H281DRAFT_05299 0.54 +0.6 42,176 - H281DRAFT_05299 0.66 -1.1 42,229 + H281DRAFT_05299 0.74 +0.3 42,468 + +0.1 42,719 - H281DRAFT_05300 0.28 +0.1 42,839 - H281DRAFT_05300 0.42 -0.1 42,839 - H281DRAFT_05300 0.42 -0.0 42,976 + H281DRAFT_05300 0.59 +0.5 42,977 - H281DRAFT_05300 0.59 +0.3 43,382 - +0.4 43,383 + +0.2 43,383 + +0.9 43,384 - -0.0 43,385 + -0.1 43,439 - +0.0 43,484 + +1.2 43,484 + -0.8 43,660 + H281DRAFT_05301 0.12 +1.0 43,660 + H281DRAFT_05301 0.12 +1.0 43,961 - H281DRAFT_05301 0.43 -1.2 43,963 + H281DRAFT_05301 0.43 +0.3 44,215 - H281DRAFT_05301 0.69 -0.3 44,215 - H281DRAFT_05301 0.69 +0.0
Or see this region's nucleotide sequence