Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05291 and H281DRAFT_05292 are separated by 13 nucleotides H281DRAFT_05292 and H281DRAFT_05293 are separated by 35 nucleotides H281DRAFT_05293 and H281DRAFT_05294 are separated by 38 nucleotides
H281DRAFT_05291: H281DRAFT_05291 - amino acid ABC transporter membrane protein 1, PAAT family, at 34,211 to 34,933
_05291
H281DRAFT_05292: H281DRAFT_05292 - amino acid ABC transporter membrane protein 2, PAAT family, at 34,947 to 35,702
_05292
H281DRAFT_05293: H281DRAFT_05293 - amino acid ABC transporter ATP-binding protein, PAAT family, at 35,738 to 36,529
_05293
H281DRAFT_05294: H281DRAFT_05294 - histidine ammonia-lyase, at 36,568 to 38,244
_05294
Position (kb) 35
36
37 Strain fitness (log2 ratio) -1
0
1 at 34.809 kb on - strand, within H281DRAFT_05291 at 34.841 kb on + strand, within H281DRAFT_05291 at 34.842 kb on - strand, within H281DRAFT_05291 at 35.119 kb on - strand, within H281DRAFT_05292 at 35.120 kb on + strand, within H281DRAFT_05292 at 35.237 kb on + strand, within H281DRAFT_05292 at 35.237 kb on + strand, within H281DRAFT_05292 at 35.238 kb on - strand, within H281DRAFT_05292 at 35.280 kb on - strand, within H281DRAFT_05292 at 35.520 kb on + strand, within H281DRAFT_05292 at 35.559 kb on + strand, within H281DRAFT_05292 at 35.560 kb on - strand, within H281DRAFT_05292 at 35.746 kb on + strand at 36.316 kb on - strand, within H281DRAFT_05293 at 36.528 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 34,809 - H281DRAFT_05291 0.83 -0.2 34,841 + H281DRAFT_05291 0.87 -1.6 34,842 - H281DRAFT_05291 0.87 +0.6 35,119 - H281DRAFT_05292 0.23 -0.9 35,120 + H281DRAFT_05292 0.23 +0.9 35,237 + H281DRAFT_05292 0.38 +0.0 35,237 + H281DRAFT_05292 0.38 +0.7 35,238 - H281DRAFT_05292 0.38 -0.7 35,280 - H281DRAFT_05292 0.44 +0.2 35,520 + H281DRAFT_05292 0.76 +0.9 35,559 + H281DRAFT_05292 0.81 -0.9 35,560 - H281DRAFT_05292 0.81 -0.7 35,746 + -0.0 36,316 - H281DRAFT_05293 0.73 +0.7 36,528 - -0.4
Or see this region's nucleotide sequence