Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05287 and H281DRAFT_05288 are separated by 262 nucleotides H281DRAFT_05288 and H281DRAFT_05289 are separated by 28 nucleotides H281DRAFT_05289 and H281DRAFT_05290 are separated by 331 nucleotides
H281DRAFT_05287: H281DRAFT_05287 - porin, OprB family, at 29,560 to 31,119
_05287
H281DRAFT_05288: H281DRAFT_05288 - hypothetical protein, at 31,382 to 32,065
_05288
H281DRAFT_05289: H281DRAFT_05289 - N-hydroxyarylamine O-acetyltransferase, at 32,094 to 32,930
_05289
H281DRAFT_05290: H281DRAFT_05290 - amino acid ABC transporter substrate-binding protein, PAAT family, at 33,262 to 34,122
_05290
Position (kb)
32
33 Strain fitness (log2 ratio)
-1
0
1 at 31.131 kb on + strand at 31.132 kb on - strand at 31.246 kb on + strand at 31.246 kb on + strand at 31.286 kb on + strand at 31.367 kb on + strand at 31.377 kb on + strand at 31.378 kb on - strand at 31.378 kb on - strand at 31.381 kb on + strand at 31.381 kb on + strand at 31.547 kb on + strand, within H281DRAFT_05288 at 31.548 kb on - strand, within H281DRAFT_05288 at 31.935 kb on - strand, within H281DRAFT_05288 at 31.935 kb on - strand, within H281DRAFT_05288 at 31.995 kb on + strand, within H281DRAFT_05288 at 32.094 kb on - strand at 32.335 kb on + strand, within H281DRAFT_05289 at 32.418 kb on - strand, within H281DRAFT_05289 at 32.796 kb on - strand, within H281DRAFT_05289 at 32.929 kb on - strand at 32.971 kb on - strand at 33.109 kb on - strand at 33.751 kb on - strand, within H281DRAFT_05290 at 33.751 kb on - strand, within H281DRAFT_05290 at 33.751 kb on - strand, within H281DRAFT_05290 at 33.782 kb on - strand, within H281DRAFT_05290 at 33.783 kb on + strand, within H281DRAFT_05290 at 33.784 kb on - strand, within H281DRAFT_05290 at 33.833 kb on - strand, within H281DRAFT_05290 at 33.904 kb on + strand, within H281DRAFT_05290 at 33.905 kb on - strand, within H281DRAFT_05290
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 31,131 + +0.6 31,132 - +0.3 31,246 + -0.5 31,246 + +0.6 31,286 + -0.0 31,367 + +1.0 31,377 + +0.1 31,378 - -1.3 31,378 - -0.3 31,381 + +0.0 31,381 + +0.2 31,547 + H281DRAFT_05288 0.24 -0.0 31,548 - H281DRAFT_05288 0.24 +0.1 31,935 - H281DRAFT_05288 0.81 +0.3 31,935 - H281DRAFT_05288 0.81 -0.3 31,995 + H281DRAFT_05288 0.90 +0.1 32,094 - -0.1 32,335 + H281DRAFT_05289 0.29 +0.3 32,418 - H281DRAFT_05289 0.39 +0.8 32,796 - H281DRAFT_05289 0.84 +1.1 32,929 - +0.6 32,971 - +0.4 33,109 - +1.1 33,751 - H281DRAFT_05290 0.57 -0.4 33,751 - H281DRAFT_05290 0.57 +0.2 33,751 - H281DRAFT_05290 0.57 -0.4 33,782 - H281DRAFT_05290 0.60 +1.1 33,783 + H281DRAFT_05290 0.61 -0.1 33,784 - H281DRAFT_05290 0.61 -0.2 33,833 - H281DRAFT_05290 0.66 +0.8 33,904 + H281DRAFT_05290 0.75 +0.7 33,905 - H281DRAFT_05290 0.75 -0.3
Or see this region's nucleotide sequence