Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05285 and H281DRAFT_05286 are separated by 102 nucleotides H281DRAFT_05286 and H281DRAFT_05287 are separated by 45 nucleotides
H281DRAFT_05285: H281DRAFT_05285 - Threonine/homoserine efflux transporter RhtA, at 27,592 to 28,524
_05285
H281DRAFT_05286: H281DRAFT_05286 - transcriptional regulator, LysR family, at 28,627 to 29,514
_05286
H281DRAFT_05287: H281DRAFT_05287 - porin, OprB family, at 29,560 to 31,119
_05287
Position (kb) 28
29
30 Strain fitness (log2 ratio) -1
0
1
2 at 27.637 kb on + strand at 27.827 kb on + strand, within H281DRAFT_05285 at 27.827 kb on + strand, within H281DRAFT_05285 at 27.828 kb on - strand, within H281DRAFT_05285 at 27.828 kb on - strand, within H281DRAFT_05285 at 27.828 kb on - strand at 27.912 kb on + strand, within H281DRAFT_05285 at 28.064 kb on + strand, within H281DRAFT_05285 at 28.071 kb on + strand, within H281DRAFT_05285 at 28.825 kb on - strand at 29.182 kb on + strand, within H281DRAFT_05286 at 29.211 kb on + strand, within H281DRAFT_05286 at 29.657 kb on + strand at 29.699 kb on + strand at 29.706 kb on - strand at 29.744 kb on + strand, within H281DRAFT_05287 at 30.075 kb on - strand, within H281DRAFT_05287 at 30.104 kb on + strand, within H281DRAFT_05287 at 30.122 kb on + strand, within H281DRAFT_05287 at 30.122 kb on + strand, within H281DRAFT_05287 at 30.123 kb on - strand, within H281DRAFT_05287 at 30.198 kb on - strand, within H281DRAFT_05287 at 30.389 kb on + strand, within H281DRAFT_05287
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 27,637 + +1.0 27,827 + H281DRAFT_05285 0.25 -0.4 27,827 + H281DRAFT_05285 0.25 +0.3 27,828 - H281DRAFT_05285 0.25 +1.0 27,828 - H281DRAFT_05285 0.25 -0.8 27,828 - +0.7 27,912 + H281DRAFT_05285 0.34 +0.8 28,064 + H281DRAFT_05285 0.51 +0.3 28,071 + H281DRAFT_05285 0.51 +0.7 28,825 - +2.7 29,182 + H281DRAFT_05286 0.62 +0.7 29,211 + H281DRAFT_05286 0.66 +0.7 29,657 + -0.2 29,699 + +0.2 29,706 - -1.3 29,744 + H281DRAFT_05287 0.12 +0.4 30,075 - H281DRAFT_05287 0.33 +0.5 30,104 + H281DRAFT_05287 0.35 -0.0 30,122 + H281DRAFT_05287 0.36 +0.1 30,122 + H281DRAFT_05287 0.36 +0.3 30,123 - H281DRAFT_05287 0.36 -0.1 30,198 - H281DRAFT_05287 0.41 -1.3 30,389 + H281DRAFT_05287 0.53 +1.2
Or see this region's nucleotide sequence