Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05280 and H281DRAFT_05281 are separated by 5 nucleotides H281DRAFT_05281 and H281DRAFT_05282 overlap by 1 nucleotides H281DRAFT_05282 and H281DRAFT_05283 are separated by 8 nucleotides H281DRAFT_05283 and H281DRAFT_05284 are separated by 169 nucleotides
H281DRAFT_05280: H281DRAFT_05280 - malonate decarboxylase delta subunit, at 22,326 to 22,640
_05280
H281DRAFT_05281: H281DRAFT_05281 - triphosphoribosyl-dephospho-CoA synthase, at 22,646 to 23,608
_05281
H281DRAFT_05282: H281DRAFT_05282 - malonate decarboxylase alpha subunit, at 23,608 to 25,269
_05282
H281DRAFT_05283: H281DRAFT_05283 - transcriptional regulator, GntR family, at 25,278 to 26,051
_05283
H281DRAFT_05284: H281DRAFT_05284 - Predicted arabinose efflux permease, MFS family, at 26,221 to 27,519
_05284
Position (kb) 23
24
25
26 Strain fitness (log2 ratio) -1
0
1 at 23.029 kb on - strand, within H281DRAFT_05281 at 23.639 kb on + strand at 23.639 kb on + strand at 23.640 kb on - strand at 23.909 kb on + strand, within H281DRAFT_05282 at 23.909 kb on + strand, within H281DRAFT_05282 at 23.909 kb on + strand, within H281DRAFT_05282 at 23.910 kb on - strand, within H281DRAFT_05282 at 24.002 kb on + strand, within H281DRAFT_05282 at 24.002 kb on + strand, within H281DRAFT_05282 at 24.002 kb on + strand, within H281DRAFT_05282 at 24.003 kb on - strand, within H281DRAFT_05282 at 24.287 kb on - strand, within H281DRAFT_05282 at 24.308 kb on + strand, within H281DRAFT_05282 at 24.308 kb on + strand, within H281DRAFT_05282 at 24.524 kb on + strand, within H281DRAFT_05282 at 24.860 kb on + strand, within H281DRAFT_05282 at 24.861 kb on - strand, within H281DRAFT_05282 at 25.489 kb on + strand, within H281DRAFT_05283 at 25.490 kb on - strand, within H281DRAFT_05283 at 25.490 kb on - strand, within H281DRAFT_05283 at 25.586 kb on - strand, within H281DRAFT_05283 at 25.621 kb on + strand, within H281DRAFT_05283 at 25.622 kb on - strand, within H281DRAFT_05283 at 25.622 kb on - strand, within H281DRAFT_05283 at 25.623 kb on + strand, within H281DRAFT_05283 at 25.624 kb on - strand, within H281DRAFT_05283 at 25.748 kb on - strand, within H281DRAFT_05283 at 25.932 kb on - strand, within H281DRAFT_05283 at 25.959 kb on + strand, within H281DRAFT_05283 at 26.061 kb on - strand at 26.190 kb on + strand at 26.190 kb on + strand at 26.191 kb on - strand at 26.191 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 23,029 - H281DRAFT_05281 0.40 +0.0 23,639 + -0.6 23,639 + +0.6 23,640 - -0.7 23,909 + H281DRAFT_05282 0.18 -0.6 23,909 + H281DRAFT_05282 0.18 +0.0 23,909 + H281DRAFT_05282 0.18 -0.9 23,910 - H281DRAFT_05282 0.18 -0.2 24,002 + H281DRAFT_05282 0.24 -0.1 24,002 + H281DRAFT_05282 0.24 +0.4 24,002 + H281DRAFT_05282 0.24 +0.2 24,003 - H281DRAFT_05282 0.24 +0.7 24,287 - H281DRAFT_05282 0.41 +0.7 24,308 + H281DRAFT_05282 0.42 +0.4 24,308 + H281DRAFT_05282 0.42 +0.3 24,524 + H281DRAFT_05282 0.55 -0.2 24,860 + H281DRAFT_05282 0.75 +1.0 24,861 - H281DRAFT_05282 0.75 +1.4 25,489 + H281DRAFT_05283 0.27 -0.6 25,490 - H281DRAFT_05283 0.27 -0.4 25,490 - H281DRAFT_05283 0.27 +0.4 25,586 - H281DRAFT_05283 0.40 +0.4 25,621 + H281DRAFT_05283 0.44 -0.3 25,622 - H281DRAFT_05283 0.44 -0.2 25,622 - H281DRAFT_05283 0.44 -0.4 25,623 + H281DRAFT_05283 0.45 +0.5 25,624 - H281DRAFT_05283 0.45 -0.0 25,748 - H281DRAFT_05283 0.61 +0.2 25,932 - H281DRAFT_05283 0.84 -0.5 25,959 + H281DRAFT_05283 0.88 +0.5 26,061 - -0.5 26,190 + -0.4 26,190 + -1.0 26,191 - -0.9 26,191 - -0.0
Or see this region's nucleotide sequence