Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05198 and H281DRAFT_05199 are separated by 218 nucleotides H281DRAFT_05199 and H281DRAFT_05200 are separated by 533 nucleotides
H281DRAFT_05198: H281DRAFT_05198 - RND family efflux transporter, MFP subunit, at 159,979 to 161,148
_05198
H281DRAFT_05199: H281DRAFT_05199 - transcriptional regulator, TetR family, at 161,367 to 161,984
_05199
H281DRAFT_05200: H281DRAFT_05200 - transcriptional regulator, LysR family, at 162,518 to 163,528
_05200
Position (kb) 161
162 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 160.489 kb on + strand, within H281DRAFT_05198 at 160.490 kb on - strand, within H281DRAFT_05198 at 160.490 kb on - strand at 160.608 kb on - strand, within H281DRAFT_05198 at 160.608 kb on - strand, within H281DRAFT_05198 at 160.677 kb on - strand, within H281DRAFT_05198 at 160.763 kb on + strand, within H281DRAFT_05198 at 160.764 kb on - strand, within H281DRAFT_05198 at 160.767 kb on + strand, within H281DRAFT_05198 at 160.768 kb on - strand, within H281DRAFT_05198 at 160.768 kb on - strand, within H281DRAFT_05198 at 160.769 kb on + strand, within H281DRAFT_05198 at 160.769 kb on + strand, within H281DRAFT_05198 at 160.769 kb on + strand, within H281DRAFT_05198 at 160.978 kb on - strand, within H281DRAFT_05198 at 161.186 kb on - strand at 161.269 kb on + strand at 161.302 kb on + strand at 161.315 kb on + strand at 161.355 kb on - strand at 161.502 kb on + strand, within H281DRAFT_05199 at 161.502 kb on + strand, within H281DRAFT_05199 at 161.505 kb on - strand, within H281DRAFT_05199 at 161.560 kb on + strand, within H281DRAFT_05199 at 161.656 kb on - strand, within H281DRAFT_05199 at 161.658 kb on + strand, within H281DRAFT_05199 at 161.658 kb on + strand, within H281DRAFT_05199 at 161.659 kb on - strand, within H281DRAFT_05199 at 161.790 kb on + strand, within H281DRAFT_05199 at 161.892 kb on + strand, within H281DRAFT_05199 at 161.892 kb on + strand, within H281DRAFT_05199 at 161.894 kb on + strand, within H281DRAFT_05199 at 162.038 kb on - strand at 162.159 kb on + strand at 162.160 kb on - strand at 162.160 kb on - strand at 162.160 kb on - strand at 162.261 kb on + strand at 162.262 kb on - strand at 162.263 kb on + strand at 162.292 kb on + strand at 162.292 kb on + strand at 162.292 kb on + strand at 162.333 kb on - strand at 162.386 kb on + strand at 162.386 kb on + strand at 162.386 kb on + strand at 162.386 kb on + strand at 162.387 kb on - strand at 162.387 kb on - strand at 162.387 kb on - strand at 162.387 kb on - strand at 162.387 kb on - strand at 162.387 kb on - strand at 162.467 kb on + strand at 162.710 kb on + strand, within H281DRAFT_05200 at 162.710 kb on + strand, within H281DRAFT_05200 at 162.857 kb on + strand, within H281DRAFT_05200 at 162.857 kb on + strand, within H281DRAFT_05200 at 162.857 kb on + strand, within H281DRAFT_05200 at 162.869 kb on + strand, within H281DRAFT_05200 at 162.944 kb on - strand, within H281DRAFT_05200
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 160,489 + H281DRAFT_05198 0.44 +0.4 160,490 - H281DRAFT_05198 0.44 -0.3 160,490 - +3.9 160,608 - H281DRAFT_05198 0.54 +0.1 160,608 - H281DRAFT_05198 0.54 -0.5 160,677 - H281DRAFT_05198 0.60 +1.0 160,763 + H281DRAFT_05198 0.67 -0.5 160,764 - H281DRAFT_05198 0.67 +0.6 160,767 + H281DRAFT_05198 0.67 -1.2 160,768 - H281DRAFT_05198 0.67 +0.8 160,768 - H281DRAFT_05198 0.67 +1.5 160,769 + H281DRAFT_05198 0.68 -0.2 160,769 + H281DRAFT_05198 0.68 -1.4 160,769 + H281DRAFT_05198 0.68 +0.6 160,978 - H281DRAFT_05198 0.85 -0.1 161,186 - +1.6 161,269 + -1.7 161,302 + +0.1 161,315 + -0.1 161,355 - +0.8 161,502 + H281DRAFT_05199 0.22 -0.7 161,502 + H281DRAFT_05199 0.22 -2.9 161,505 - H281DRAFT_05199 0.22 -4.0 161,560 + H281DRAFT_05199 0.31 -1.5 161,656 - H281DRAFT_05199 0.47 +0.4 161,658 + H281DRAFT_05199 0.47 -2.7 161,658 + H281DRAFT_05199 0.47 -3.2 161,659 - H281DRAFT_05199 0.47 -2.4 161,790 + H281DRAFT_05199 0.68 -2.2 161,892 + H281DRAFT_05199 0.85 -4.7 161,892 + H281DRAFT_05199 0.85 -2.6 161,894 + H281DRAFT_05199 0.85 -3.1 162,038 - -0.3 162,159 + -1.5 162,160 - +2.4 162,160 - +1.1 162,160 - -0.4 162,261 + +0.3 162,262 - +1.2 162,263 + -0.2 162,292 + +0.8 162,292 + +0.8 162,292 + +0.9 162,333 - -0.4 162,386 + +0.5 162,386 + +0.7 162,386 + +0.1 162,386 + +0.2 162,387 - -0.9 162,387 - +0.5 162,387 - +0.7 162,387 - +2.8 162,387 - -2.9 162,387 - -0.4 162,467 + +0.4 162,710 + H281DRAFT_05200 0.19 -0.4 162,710 + H281DRAFT_05200 0.19 +0.2 162,857 + H281DRAFT_05200 0.34 -0.7 162,857 + H281DRAFT_05200 0.34 +1.0 162,857 + H281DRAFT_05200 0.34 -0.1 162,869 + H281DRAFT_05200 0.35 +2.0 162,944 - H281DRAFT_05200 0.42 +0.9
Or see this region's nucleotide sequence