Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05138 and H281DRAFT_05139 are separated by 168 nucleotides H281DRAFT_05139 and H281DRAFT_05140 are separated by 91 nucleotides H281DRAFT_05140 and H281DRAFT_05141 are separated by 2 nucleotides
H281DRAFT_05138: H281DRAFT_05138 - Predicted amino acid dehydrogenase, at 92,618 to 93,832
_05138
H281DRAFT_05139: H281DRAFT_05139 - Copper binding protein CusF, at 94,001 to 94,258
_05139
H281DRAFT_05140: H281DRAFT_05140 - Thiosulfate reductase cytochrome b subunit, at 94,350 to 94,997
_05140
H281DRAFT_05141: H281DRAFT_05141 - sulfoxide reductase catalytic subunit YedY, at 95,000 to 95,791
_05141
Position (kb) 94
95 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 93.067 kb on + strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.190 kb on - strand, within H281DRAFT_05138 at 93.190 kb on - strand, within H281DRAFT_05138 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.387 kb on + strand, within H281DRAFT_05138 at 93.388 kb on - strand, within H281DRAFT_05138 at 93.652 kb on + strand, within H281DRAFT_05138 at 93.816 kb on + strand at 93.817 kb on - strand at 93.922 kb on + strand at 94.334 kb on + strand at 94.335 kb on - strand at 94.411 kb on - strand at 94.626 kb on + strand, within H281DRAFT_05140 at 94.626 kb on + strand, within H281DRAFT_05140 at 94.626 kb on + strand, within H281DRAFT_05140 at 94.627 kb on - strand, within H281DRAFT_05140 at 94.753 kb on - strand, within H281DRAFT_05140 at 94.776 kb on + strand at 94.776 kb on + strand, within H281DRAFT_05140
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 93,067 + H281DRAFT_05138 0.37 +0.6 93,068 - H281DRAFT_05138 0.37 -0.4 93,068 - H281DRAFT_05138 0.37 -3.3 93,068 - H281DRAFT_05138 0.37 +0.2 93,190 - H281DRAFT_05138 0.47 +0.5 93,190 - H281DRAFT_05138 0.47 -0.3 93,375 + H281DRAFT_05138 0.62 -0.0 93,375 + H281DRAFT_05138 0.62 -0.9 93,376 - H281DRAFT_05138 0.62 +1.7 93,376 - H281DRAFT_05138 0.62 +0.1 93,387 + H281DRAFT_05138 0.63 -0.1 93,388 - H281DRAFT_05138 0.63 +0.2 93,652 + H281DRAFT_05138 0.85 -0.2 93,816 + -0.5 93,817 - +0.3 93,922 + -0.4 94,334 + +0.1 94,335 - -0.4 94,411 - -0.1 94,626 + H281DRAFT_05140 0.43 -0.4 94,626 + H281DRAFT_05140 0.43 +0.7 94,626 + H281DRAFT_05140 0.43 +0.1 94,627 - H281DRAFT_05140 0.43 +1.6 94,753 - H281DRAFT_05140 0.62 -0.8 94,776 + +2.4 94,776 + H281DRAFT_05140 0.66 +0.5
Or see this region's nucleotide sequence