Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05136 and H281DRAFT_05137 are separated by 10 nucleotides H281DRAFT_05137 and H281DRAFT_05138 are separated by 28 nucleotides
H281DRAFT_05136: H281DRAFT_05136 - response regulator receiver sensor signal transduction histidine kinase (EC 2.7.13.3), at 88,710 to 89,870
_05136
H281DRAFT_05137: H281DRAFT_05137 - Signal transduction histidine kinase, at 89,881 to 92,589
_05137
H281DRAFT_05138: H281DRAFT_05138 - Predicted amino acid dehydrogenase, at 92,618 to 93,832
_05138
Position (kb) 89
90
91
92
93 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 89.095 kb on - strand at 89.233 kb on - strand, within H281DRAFT_05136 at 89.233 kb on - strand, within H281DRAFT_05136 at 89.233 kb on - strand, within H281DRAFT_05136 at 89.270 kb on + strand, within H281DRAFT_05136 at 89.296 kb on - strand, within H281DRAFT_05136 at 89.489 kb on + strand, within H281DRAFT_05136 at 89.883 kb on - strand at 89.929 kb on - strand at 89.958 kb on + strand at 89.958 kb on + strand at 90.113 kb on + strand at 90.113 kb on + strand at 90.114 kb on - strand at 90.527 kb on + strand, within H281DRAFT_05137 at 90.527 kb on + strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.528 kb on - strand, within H281DRAFT_05137 at 90.810 kb on - strand, within H281DRAFT_05137 at 90.834 kb on - strand, within H281DRAFT_05137 at 91.031 kb on + strand, within H281DRAFT_05137 at 91.508 kb on - strand, within H281DRAFT_05137 at 91.769 kb on + strand, within H281DRAFT_05137 at 91.769 kb on + strand, within H281DRAFT_05137 at 92.358 kb on - strand at 92.474 kb on + strand at 92.475 kb on - strand at 92.475 kb on - strand at 92.584 kb on + strand at 92.585 kb on - strand at 92.609 kb on - strand at 92.627 kb on - strand at 92.812 kb on + strand, within H281DRAFT_05138 at 92.812 kb on + strand, within H281DRAFT_05138 at 92.813 kb on - strand, within H281DRAFT_05138 at 92.814 kb on + strand, within H281DRAFT_05138 at 92.815 kb on - strand, within H281DRAFT_05138 at 92.815 kb on - strand, within H281DRAFT_05138 at 92.890 kb on + strand, within H281DRAFT_05138 at 92.890 kb on + strand, within H281DRAFT_05138 at 92.890 kb on + strand, within H281DRAFT_05138 at 92.891 kb on - strand, within H281DRAFT_05138 at 92.891 kb on - strand, within H281DRAFT_05138 at 92.892 kb on + strand, within H281DRAFT_05138 at 92.892 kb on + strand, within H281DRAFT_05138 at 92.893 kb on - strand, within H281DRAFT_05138 at 92.893 kb on - strand, within H281DRAFT_05138 at 92.894 kb on + strand, within H281DRAFT_05138 at 92.895 kb on - strand at 92.895 kb on - strand, within H281DRAFT_05138 at 92.899 kb on + strand, within H281DRAFT_05138 at 92.899 kb on + strand, within H281DRAFT_05138 at 92.899 kb on + strand, within H281DRAFT_05138 at 92.899 kb on + strand at 93.067 kb on + strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.068 kb on - strand, within H281DRAFT_05138 at 93.190 kb on - strand, within H281DRAFT_05138 at 93.190 kb on - strand, within H281DRAFT_05138 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.387 kb on + strand, within H281DRAFT_05138 at 93.388 kb on - strand, within H281DRAFT_05138
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 89,095 - +0.5 89,233 - H281DRAFT_05136 0.45 -0.2 89,233 - H281DRAFT_05136 0.45 +0.9 89,233 - H281DRAFT_05136 0.45 -0.0 89,270 + H281DRAFT_05136 0.48 +0.6 89,296 - H281DRAFT_05136 0.50 +1.1 89,489 + H281DRAFT_05136 0.67 -0.4 89,883 - -0.1 89,929 - +0.2 89,958 + -1.3 89,958 + +0.4 90,113 + +1.5 90,113 + +1.6 90,114 - +0.1 90,527 + H281DRAFT_05137 0.24 -0.1 90,527 + H281DRAFT_05137 0.24 +0.4 90,528 - H281DRAFT_05137 0.24 +0.5 90,528 - H281DRAFT_05137 0.24 +1.0 90,528 - H281DRAFT_05137 0.24 +0.1 90,528 - H281DRAFT_05137 0.24 +1.8 90,810 - H281DRAFT_05137 0.34 +0.3 90,834 - H281DRAFT_05137 0.35 +1.5 91,031 + H281DRAFT_05137 0.42 +0.1 91,508 - H281DRAFT_05137 0.60 +0.3 91,769 + H281DRAFT_05137 0.70 -0.3 91,769 + H281DRAFT_05137 0.70 -0.3 92,358 - +0.6 92,474 + -0.5 92,475 - -0.4 92,475 - -0.9 92,584 + -0.8 92,585 - +0.4 92,609 - +0.4 92,627 - +0.2 92,812 + H281DRAFT_05138 0.16 -1.3 92,812 + H281DRAFT_05138 0.16 +0.5 92,813 - H281DRAFT_05138 0.16 +0.0 92,814 + H281DRAFT_05138 0.16 -0.4 92,815 - H281DRAFT_05138 0.16 -0.6 92,815 - H281DRAFT_05138 0.16 +0.2 92,890 + H281DRAFT_05138 0.22 +0.1 92,890 + H281DRAFT_05138 0.22 +0.7 92,890 + H281DRAFT_05138 0.22 +1.1 92,891 - H281DRAFT_05138 0.22 +0.1 92,891 - H281DRAFT_05138 0.22 +0.1 92,892 + H281DRAFT_05138 0.23 -0.2 92,892 + H281DRAFT_05138 0.23 -0.2 92,893 - H281DRAFT_05138 0.23 +0.3 92,893 - H281DRAFT_05138 0.23 +0.4 92,894 + H281DRAFT_05138 0.23 +0.5 92,895 - +0.4 92,895 - H281DRAFT_05138 0.23 +0.0 92,899 + H281DRAFT_05138 0.23 +0.3 92,899 + H281DRAFT_05138 0.23 +0.4 92,899 + H281DRAFT_05138 0.23 -0.5 92,899 + -0.8 93,067 + H281DRAFT_05138 0.37 +0.6 93,068 - H281DRAFT_05138 0.37 -0.4 93,068 - H281DRAFT_05138 0.37 -3.3 93,068 - H281DRAFT_05138 0.37 +0.2 93,190 - H281DRAFT_05138 0.47 +0.5 93,190 - H281DRAFT_05138 0.47 -0.3 93,375 + H281DRAFT_05138 0.62 -0.0 93,375 + H281DRAFT_05138 0.62 -0.9 93,376 - H281DRAFT_05138 0.62 +1.7 93,376 - H281DRAFT_05138 0.62 +0.1 93,387 + H281DRAFT_05138 0.63 -0.1 93,388 - H281DRAFT_05138 0.63 +0.2
Or see this region's nucleotide sequence