Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05074 and H281DRAFT_05075 are separated by 219 nucleotides H281DRAFT_05075 and H281DRAFT_05076 are separated by 1 nucleotides H281DRAFT_05076 and H281DRAFT_05077 overlap by 4 nucleotides H281DRAFT_05077 and H281DRAFT_05078 are separated by 143 nucleotides
H281DRAFT_05074: H281DRAFT_05074 - protease I, at 13,528 to 14,109
_05074
H281DRAFT_05075: H281DRAFT_05075 - hypothetical protein, at 14,329 to 14,805
_05075
H281DRAFT_05076: H281DRAFT_05076 - hypothetical protein, at 14,807 to 14,938
_05076
H281DRAFT_05077: H281DRAFT_05077 - transcriptional regulator, BadM/Rrf2 family, at 14,935 to 15,390
_05077
H281DRAFT_05078: H281DRAFT_05078 - hypothetical protein, at 15,534 to 16,181
_05078
Position (kb) 14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 13.830 kb on - strand, within H281DRAFT_05074 at 13.830 kb on - strand, within H281DRAFT_05074 at 13.868 kb on + strand, within H281DRAFT_05074 at 14.142 kb on + strand at 14.178 kb on + strand at 14.179 kb on - strand at 14.325 kb on - strand at 14.325 kb on - strand at 14.653 kb on - strand, within H281DRAFT_05075 at 14.653 kb on - strand, within H281DRAFT_05075 at 14.770 kb on + strand at 15.169 kb on + strand, within H281DRAFT_05077 at 15.485 kb on + strand at 15.924 kb on + strand, within H281DRAFT_05078 at 15.926 kb on + strand, within H281DRAFT_05078 at 15.927 kb on - strand, within H281DRAFT_05078
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 13,830 - H281DRAFT_05074 0.52 -0.1 13,830 - H281DRAFT_05074 0.52 +0.6 13,868 + H281DRAFT_05074 0.58 +0.8 14,142 + -0.8 14,178 + +0.1 14,179 - +0.6 14,325 - -1.0 14,325 - +0.4 14,653 - H281DRAFT_05075 0.68 -0.4 14,653 - H281DRAFT_05075 0.68 +0.8 14,770 + -0.3 15,169 + H281DRAFT_05077 0.51 -3.0 15,485 + +0.7 15,924 + H281DRAFT_05078 0.60 -0.8 15,926 + H281DRAFT_05078 0.60 -0.4 15,927 - H281DRAFT_05078 0.61 -0.4
Or see this region's nucleotide sequence