Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05065 and H281DRAFT_05066 are separated by 104 nucleotides H281DRAFT_05066 and H281DRAFT_05067 are separated by 146 nucleotides H281DRAFT_05067 and H281DRAFT_05068 are separated by 254 nucleotides H281DRAFT_05068 and H281DRAFT_05069 are separated by 93 nucleotides
H281DRAFT_05065: H281DRAFT_05065 - Putative SOS response-associated peptidase YedK, at 5,909 to 6,871
_05065
H281DRAFT_05066: H281DRAFT_05066 - hypothetical protein, at 6,976 to 7,248
_05066
H281DRAFT_05067: H281DRAFT_05067 - protein of unknown function (DUF3597), at 7,395 to 7,847
_05067
H281DRAFT_05068: H281DRAFT_05068 - Uncharacterized conserved protein, at 8,102 to 8,380
_05068
H281DRAFT_05069: H281DRAFT_05069 - Sporulation protein YlmC, PRC-barrel domain family, at 8,474 to 8,947
_05069
Position (kb) 7
8 Strain fitness (log2 ratio) -1
0
1
2
3 at 6.421 kb on + strand, within H281DRAFT_05065 at 6.440 kb on + strand, within H281DRAFT_05065 at 6.549 kb on - strand, within H281DRAFT_05065 at 6.562 kb on - strand, within H281DRAFT_05065 at 6.755 kb on - strand, within H281DRAFT_05065 at 6.755 kb on - strand, within H281DRAFT_05065 at 6.771 kb on + strand, within H281DRAFT_05065 at 6.815 kb on + strand at 6.816 kb on - strand at 6.849 kb on - strand at 6.856 kb on + strand at 6.857 kb on - strand at 6.980 kb on + strand at 7.504 kb on + strand, within H281DRAFT_05067 at 7.505 kb on - strand, within H281DRAFT_05067 at 7.505 kb on - strand, within H281DRAFT_05067 at 7.920 kb on + strand at 8.002 kb on + strand at 8.006 kb on + strand at 8.270 kb on + strand, within H281DRAFT_05068 at 8.417 kb on + strand at 8.551 kb on - strand, within H281DRAFT_05069 at 8.554 kb on - strand, within H281DRAFT_05069 at 8.554 kb on - strand, within H281DRAFT_05069 at 8.558 kb on - strand, within H281DRAFT_05069 at 8.558 kb on - strand, within H281DRAFT_05069 at 8.754 kb on + strand, within H281DRAFT_05069
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 6,421 + H281DRAFT_05065 0.53 -0.7 6,440 + H281DRAFT_05065 0.55 -0.9 6,549 - H281DRAFT_05065 0.66 +0.5 6,562 - H281DRAFT_05065 0.68 +1.1 6,755 - H281DRAFT_05065 0.88 +0.6 6,755 - H281DRAFT_05065 0.88 +0.3 6,771 + H281DRAFT_05065 0.90 +0.5 6,815 + -1.1 6,816 - +0.7 6,849 - -0.2 6,856 + -0.2 6,857 - +1.0 6,980 + +0.8 7,504 + H281DRAFT_05067 0.24 -1.2 7,505 - H281DRAFT_05067 0.24 +0.7 7,505 - H281DRAFT_05067 0.24 -1.5 7,920 + +0.9 8,002 + +0.3 8,006 + +0.2 8,270 + H281DRAFT_05068 0.60 +3.0 8,417 + +0.1 8,551 - H281DRAFT_05069 0.16 +0.4 8,554 - H281DRAFT_05069 0.17 -1.3 8,554 - H281DRAFT_05069 0.17 -0.3 8,558 - H281DRAFT_05069 0.18 -0.4 8,558 - H281DRAFT_05069 0.18 -0.1 8,754 + H281DRAFT_05069 0.59 -0.8
Or see this region's nucleotide sequence