Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05062 and H281DRAFT_05063 are separated by 75 nucleotides H281DRAFT_05063 and H281DRAFT_05064 are separated by 93 nucleotides
H281DRAFT_05062: H281DRAFT_05062 - MFS transporter, putative metabolite:H+ symporter, at 1,216 to 2,655
_05062
H281DRAFT_05063: H281DRAFT_05063 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit, at 2,731 to 4,689
_05063
H281DRAFT_05064: H281DRAFT_05064 - DNA-binding transcriptional regulator, LysR family, at 4,783 to 5,682
_05064
Position (kb) 2
3
4
5 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 2.081 kb on - strand, within H281DRAFT_05062 at 2.140 kb on - strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.166 kb on - strand, within H281DRAFT_05062 at 2.166 kb on - strand, within H281DRAFT_05062 at 2.570 kb on - strand at 2.706 kb on + strand at 2.717 kb on - strand at 2.991 kb on - strand, within H281DRAFT_05063 at 2.991 kb on - strand, within H281DRAFT_05063 at 3.020 kb on - strand, within H281DRAFT_05063 at 3.086 kb on + strand, within H281DRAFT_05063 at 3.117 kb on + strand, within H281DRAFT_05063 at 3.138 kb on + strand, within H281DRAFT_05063 at 3.139 kb on - strand, within H281DRAFT_05063 at 3.139 kb on - strand, within H281DRAFT_05063 at 3.139 kb on - strand, within H281DRAFT_05063 at 3.986 kb on + strand, within H281DRAFT_05063 at 4.257 kb on + strand, within H281DRAFT_05063 at 4.499 kb on + strand at 4.693 kb on + strand at 4.764 kb on - strand at 4.797 kb on + strand at 4.807 kb on + strand at 5.011 kb on - strand, within H281DRAFT_05064 at 5.011 kb on - strand, within H281DRAFT_05064 at 5.281 kb on + strand, within H281DRAFT_05064 at 5.351 kb on - strand, within H281DRAFT_05064 at 5.351 kb on - strand, within H281DRAFT_05064 at 5.391 kb on - strand, within H281DRAFT_05064 at 5.596 kb on + strand at 5.686 kb on + strand at 5.687 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 2,081 - H281DRAFT_05062 0.60 -0.2 2,140 - H281DRAFT_05062 0.64 +0.5 2,165 + H281DRAFT_05062 0.66 +0.1 2,165 + H281DRAFT_05062 0.66 +1.1 2,165 + H281DRAFT_05062 0.66 -3.3 2,165 + H281DRAFT_05062 0.66 +0.8 2,166 - H281DRAFT_05062 0.66 -0.5 2,166 - H281DRAFT_05062 0.66 -0.2 2,570 - +0.3 2,706 + +0.2 2,717 - +0.9 2,991 - H281DRAFT_05063 0.13 -1.6 2,991 - H281DRAFT_05063 0.13 -0.7 3,020 - H281DRAFT_05063 0.15 +0.9 3,086 + H281DRAFT_05063 0.18 -1.5 3,117 + H281DRAFT_05063 0.20 +0.0 3,138 + H281DRAFT_05063 0.21 -1.0 3,139 - H281DRAFT_05063 0.21 -1.2 3,139 - H281DRAFT_05063 0.21 +0.2 3,139 - H281DRAFT_05063 0.21 -0.7 3,986 + H281DRAFT_05063 0.64 +0.8 4,257 + H281DRAFT_05063 0.78 +0.6 4,499 + +0.0 4,693 + +1.4 4,764 - -0.6 4,797 + -0.4 4,807 + +0.9 5,011 - H281DRAFT_05064 0.25 +0.7 5,011 - H281DRAFT_05064 0.25 -0.2 5,281 + H281DRAFT_05064 0.55 -1.6 5,351 - H281DRAFT_05064 0.63 -0.0 5,351 - H281DRAFT_05064 0.63 -0.1 5,391 - H281DRAFT_05064 0.68 +1.6 5,596 + -0.3 5,686 + +0.3 5,687 - -0.4
Or see this region's nucleotide sequence