Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05060 and H281DRAFT_05061 are separated by 145 nucleotides H281DRAFT_05061 and H281DRAFT_05062 are separated by 161 nucleotides H281DRAFT_05062 and H281DRAFT_05063 are separated by 75 nucleotides
H281DRAFT_05060: H281DRAFT_05060 - Permeases of the drug/metabolite transporter (DMT) superfamily, at 1 to 432
_05060
H281DRAFT_05061: H281DRAFT_05061 - Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC, at 578 to 1,054
_05061
H281DRAFT_05062: H281DRAFT_05062 - MFS transporter, putative metabolite:H+ symporter, at 1,216 to 2,655
_05062
H281DRAFT_05063: H281DRAFT_05063 - 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit, at 2,731 to 4,689
_05063
Position (kb) 1
2
3 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 0.561 kb on + strand at 0.599 kb on - strand at 1.152 kb on + strand at 1.174 kb on - strand at 1.174 kb on - strand at 1.394 kb on + strand, within H281DRAFT_05062 at 1.458 kb on - strand, within H281DRAFT_05062 at 2.081 kb on - strand, within H281DRAFT_05062 at 2.140 kb on - strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.165 kb on + strand, within H281DRAFT_05062 at 2.166 kb on - strand, within H281DRAFT_05062 at 2.166 kb on - strand, within H281DRAFT_05062 at 2.570 kb on - strand at 2.706 kb on + strand at 2.717 kb on - strand at 2.991 kb on - strand, within H281DRAFT_05063 at 2.991 kb on - strand, within H281DRAFT_05063 at 3.020 kb on - strand, within H281DRAFT_05063 at 3.086 kb on + strand, within H281DRAFT_05063 at 3.117 kb on + strand, within H281DRAFT_05063 at 3.138 kb on + strand, within H281DRAFT_05063 at 3.139 kb on - strand, within H281DRAFT_05063 at 3.139 kb on - strand, within H281DRAFT_05063 at 3.139 kb on - strand, within H281DRAFT_05063
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 561 + +0.5 599 - +0.4 1,152 + -0.6 1,174 - -0.3 1,174 - -0.6 1,394 + H281DRAFT_05062 0.12 +0.7 1,458 - H281DRAFT_05062 0.17 -1.0 2,081 - H281DRAFT_05062 0.60 -0.2 2,140 - H281DRAFT_05062 0.64 +0.5 2,165 + H281DRAFT_05062 0.66 +0.1 2,165 + H281DRAFT_05062 0.66 +1.1 2,165 + H281DRAFT_05062 0.66 -3.3 2,165 + H281DRAFT_05062 0.66 +0.8 2,166 - H281DRAFT_05062 0.66 -0.5 2,166 - H281DRAFT_05062 0.66 -0.2 2,570 - +0.3 2,706 + +0.2 2,717 - +0.9 2,991 - H281DRAFT_05063 0.13 -1.6 2,991 - H281DRAFT_05063 0.13 -0.7 3,020 - H281DRAFT_05063 0.15 +0.9 3,086 + H281DRAFT_05063 0.18 -1.5 3,117 + H281DRAFT_05063 0.20 +0.0 3,138 + H281DRAFT_05063 0.21 -1.0 3,139 - H281DRAFT_05063 0.21 -1.2 3,139 - H281DRAFT_05063 0.21 +0.2 3,139 - H281DRAFT_05063 0.21 -0.7
Or see this region's nucleotide sequence