Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05056 and H281DRAFT_05057 are separated by 110 nucleotides H281DRAFT_05057 and H281DRAFT_05058 are separated by 444 nucleotides H281DRAFT_05058 and H281DRAFT_05059 are separated by 137 nucleotides
H281DRAFT_05056: H281DRAFT_05056 - aldehyde dehydrogenase (NAD+), at 246,767 to 248,185
_05056
H281DRAFT_05057: H281DRAFT_05057 - DNA-binding transcriptional regulator, LysR family, at 248,296 to 249,195
_05057
H281DRAFT_05058: H281DRAFT_05058 - Predicted secreted hydrolase, at 249,640 to 249,840
_05058
H281DRAFT_05059: H281DRAFT_05059 - 5S rRNA. Bacterial TSU, at 249,978 to 250,077
_05059
Position (kb) 248
249
250 Strain fitness (log2 ratio) -2
-1
0
1
2 at 247.542 kb on - strand, within H281DRAFT_05056 at 247.598 kb on - strand, within H281DRAFT_05056 at 247.651 kb on + strand, within H281DRAFT_05056 at 247.652 kb on - strand, within H281DRAFT_05056 at 247.652 kb on - strand, within H281DRAFT_05056 at 247.652 kb on - strand, within H281DRAFT_05056 at 247.675 kb on + strand, within H281DRAFT_05056 at 247.850 kb on - strand, within H281DRAFT_05056 at 247.945 kb on + strand, within H281DRAFT_05056 at 247.946 kb on - strand, within H281DRAFT_05056 at 247.973 kb on - strand, within H281DRAFT_05056 at 248.163 kb on + strand at 248.186 kb on - strand at 248.455 kb on - strand, within H281DRAFT_05057 at 248.855 kb on + strand, within H281DRAFT_05057 at 248.855 kb on + strand, within H281DRAFT_05057 at 248.856 kb on - strand, within H281DRAFT_05057 at 248.963 kb on + strand, within H281DRAFT_05057 at 248.977 kb on - strand, within H281DRAFT_05057 at 249.035 kb on - strand, within H281DRAFT_05057 at 249.035 kb on - strand, within H281DRAFT_05057 at 249.107 kb on + strand at 249.108 kb on - strand at 249.108 kb on - strand at 249.116 kb on - strand at 249.194 kb on - strand at 249.194 kb on - strand at 249.322 kb on + strand at 249.322 kb on + strand at 249.323 kb on - strand at 249.340 kb on - strand at 249.406 kb on + strand at 249.407 kb on - strand at 249.407 kb on - strand at 249.547 kb on + strand at 249.549 kb on + strand at 249.549 kb on + strand at 249.550 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 247,542 - H281DRAFT_05056 0.55 +0.6 247,598 - H281DRAFT_05056 0.59 +0.1 247,651 + H281DRAFT_05056 0.62 -1.1 247,652 - H281DRAFT_05056 0.62 -0.0 247,652 - H281DRAFT_05056 0.62 -0.7 247,652 - H281DRAFT_05056 0.62 -0.2 247,675 + H281DRAFT_05056 0.64 -0.3 247,850 - H281DRAFT_05056 0.76 +1.0 247,945 + H281DRAFT_05056 0.83 -0.3 247,946 - H281DRAFT_05056 0.83 +0.0 247,973 - H281DRAFT_05056 0.85 +1.4 248,163 + +0.9 248,186 - -0.8 248,455 - H281DRAFT_05057 0.18 +0.3 248,855 + H281DRAFT_05057 0.62 +0.6 248,855 + H281DRAFT_05057 0.62 -1.2 248,856 - H281DRAFT_05057 0.62 -2.0 248,963 + H281DRAFT_05057 0.74 +0.0 248,977 - H281DRAFT_05057 0.76 -0.1 249,035 - H281DRAFT_05057 0.82 +0.3 249,035 - H281DRAFT_05057 0.82 -1.1 249,107 + -1.2 249,108 - -0.7 249,108 - +1.9 249,116 - +0.3 249,194 - -1.5 249,194 - -0.9 249,322 + -0.4 249,322 + -0.9 249,323 - -1.0 249,340 - +0.6 249,406 + +0.6 249,407 - +0.3 249,407 - +0.4 249,547 + -0.7 249,549 + -0.2 249,549 + -0.7 249,550 - -0.6
Or see this region's nucleotide sequence