Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05053 and H281DRAFT_05054 are separated by 115 nucleotides H281DRAFT_05054 and H281DRAFT_05055 are separated by 340 nucleotides H281DRAFT_05055 and H281DRAFT_05056 are separated by 370 nucleotides
H281DRAFT_05053: H281DRAFT_05053 - protein of unknown function (DUF3331), at 244,058 to 244,501
_05053
H281DRAFT_05054: H281DRAFT_05054 - Predicted periplasmic or secreted lipoprotein, at 244,617 to 245,000
_05054
H281DRAFT_05055: H281DRAFT_05055 - Signal transduction histidine kinase, at 245,341 to 246,396
_05055
H281DRAFT_05056: H281DRAFT_05056 - aldehyde dehydrogenase (NAD+), at 246,767 to 248,185
_05056
Position (kb) 245
246
247 Strain fitness (log2 ratio) -2
-1
0
1 at 244.517 kb on - strand at 244.531 kb on + strand at 244.615 kb on + strand at 244.639 kb on - strand at 244.701 kb on - strand, within H281DRAFT_05054 at 244.939 kb on + strand, within H281DRAFT_05054 at 244.940 kb on - strand, within H281DRAFT_05054 at 245.041 kb on - strand at 245.042 kb on + strand at 245.043 kb on - strand at 245.075 kb on + strand at 245.076 kb on - strand at 245.076 kb on - strand at 245.076 kb on - strand at 245.095 kb on - strand at 245.097 kb on + strand at 245.145 kb on + strand at 245.499 kb on - strand, within H281DRAFT_05055 at 245.558 kb on - strand, within H281DRAFT_05055 at 245.953 kb on + strand, within H281DRAFT_05055 at 245.954 kb on - strand, within H281DRAFT_05055 at 246.086 kb on - strand, within H281DRAFT_05055 at 246.086 kb on - strand, within H281DRAFT_05055 at 246.242 kb on + strand, within H281DRAFT_05055 at 246.242 kb on + strand, within H281DRAFT_05055 at 246.486 kb on + strand at 246.502 kb on + strand at 246.503 kb on - strand at 246.606 kb on + strand at 246.606 kb on + strand at 246.606 kb on + strand at 246.607 kb on - strand at 246.610 kb on + strand at 246.610 kb on + strand at 246.610 kb on + strand at 246.610 kb on + strand at 246.610 kb on + strand at 246.610 kb on + strand at 246.610 kb on + strand at 246.610 kb on + strand at 246.611 kb on - strand at 246.718 kb on + strand at 246.768 kb on + strand at 246.960 kb on + strand, within H281DRAFT_05056 at 246.960 kb on + strand, within H281DRAFT_05056 at 246.961 kb on - strand, within H281DRAFT_05056 at 246.975 kb on + strand, within H281DRAFT_05056 at 247.021 kb on - strand, within H281DRAFT_05056 at 247.082 kb on + strand, within H281DRAFT_05056 at 247.082 kb on + strand, within H281DRAFT_05056 at 247.082 kb on + strand, within H281DRAFT_05056 at 247.209 kb on + strand, within H281DRAFT_05056
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 244,517 - -2.5 244,531 + -1.0 244,615 + -0.2 244,639 - +0.8 244,701 - H281DRAFT_05054 0.22 -0.6 244,939 + H281DRAFT_05054 0.84 +0.6 244,940 - H281DRAFT_05054 0.84 +0.6 245,041 - +0.4 245,042 + +0.3 245,043 - -0.3 245,075 + -1.2 245,076 - -0.1 245,076 - -2.5 245,076 - -0.4 245,095 - -0.2 245,097 + -0.0 245,145 + +0.8 245,499 - H281DRAFT_05055 0.15 -0.6 245,558 - H281DRAFT_05055 0.21 -1.7 245,953 + H281DRAFT_05055 0.58 +0.0 245,954 - H281DRAFT_05055 0.58 +0.1 246,086 - H281DRAFT_05055 0.71 -0.6 246,086 - H281DRAFT_05055 0.71 -0.3 246,242 + H281DRAFT_05055 0.85 -0.7 246,242 + H281DRAFT_05055 0.85 +0.3 246,486 + -0.1 246,502 + -1.2 246,503 - +0.7 246,606 + -0.3 246,606 + -1.2 246,606 + +0.6 246,607 - -2.2 246,610 + +0.7 246,610 + -0.8 246,610 + +0.1 246,610 + +1.2 246,610 + +0.1 246,610 + -1.5 246,610 + -0.3 246,610 + -0.3 246,611 - -0.0 246,718 + +1.7 246,768 + -0.0 246,960 + H281DRAFT_05056 0.14 +0.3 246,960 + H281DRAFT_05056 0.14 +1.0 246,961 - H281DRAFT_05056 0.14 -0.5 246,975 + H281DRAFT_05056 0.15 -0.0 247,021 - H281DRAFT_05056 0.18 -0.9 247,082 + H281DRAFT_05056 0.22 -0.3 247,082 + H281DRAFT_05056 0.22 +0.6 247,082 + H281DRAFT_05056 0.22 +1.1 247,209 + H281DRAFT_05056 0.31 -0.3
Or see this region's nucleotide sequence