Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05046 and H281DRAFT_05047 are separated by 409 nucleotides H281DRAFT_05047 and H281DRAFT_05048 are separated by 68 nucleotides
H281DRAFT_05046: H281DRAFT_05046 - Signal transduction histidine kinase, at 234,423 to 235,511
_05046
H281DRAFT_05047: H281DRAFT_05047 - thioredoxin reductase (NADPH), at 235,921 to 237,612
_05047
H281DRAFT_05048: H281DRAFT_05048 - Tripartite tricarboxylate transporter TctA family protein, at 237,681 to 239,060
_05048
Position (kb) 235
236
237
238 Strain fitness (log2 ratio) -1
0
1
2 at 235.213 kb on + strand, within H281DRAFT_05046 at 235.678 kb on + strand at 235.713 kb on + strand at 235.717 kb on + strand at 235.741 kb on + strand at 235.741 kb on + strand at 235.742 kb on - strand at 236.464 kb on + strand at 236.645 kb on - strand, within H281DRAFT_05047 at 236.694 kb on - strand at 236.782 kb on + strand, within H281DRAFT_05047 at 236.783 kb on - strand, within H281DRAFT_05047 at 236.848 kb on - strand, within H281DRAFT_05047 at 237.032 kb on - strand, within H281DRAFT_05047 at 237.122 kb on + strand, within H281DRAFT_05047 at 237.153 kb on + strand, within H281DRAFT_05047 at 237.153 kb on + strand, within H281DRAFT_05047 at 237.153 kb on + strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.154 kb on - strand, within H281DRAFT_05047 at 237.229 kb on - strand, within H281DRAFT_05047 at 237.229 kb on - strand, within H281DRAFT_05047 at 237.725 kb on - strand at 237.728 kb on - strand at 237.925 kb on + strand, within H281DRAFT_05048 at 237.926 kb on - strand, within H281DRAFT_05048 at 238.154 kb on - strand, within H281DRAFT_05048 at 238.154 kb on - strand, within H281DRAFT_05048 at 238.154 kb on - strand, within H281DRAFT_05048 at 238.207 kb on + strand, within H281DRAFT_05048 at 238.207 kb on + strand, within H281DRAFT_05048 at 238.208 kb on - strand, within H281DRAFT_05048 at 238.312 kb on + strand at 238.492 kb on + strand, within H281DRAFT_05048 at 238.569 kb on + strand, within H281DRAFT_05048
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 235,213 + H281DRAFT_05046 0.73 -0.2 235,678 + -0.7 235,713 + -0.3 235,717 + -0.1 235,741 + +0.5 235,741 + +0.4 235,742 - -1.1 236,464 + -1.5 236,645 - H281DRAFT_05047 0.43 -0.1 236,694 - +1.8 236,782 + H281DRAFT_05047 0.51 -0.5 236,783 - H281DRAFT_05047 0.51 -0.8 236,848 - H281DRAFT_05047 0.55 +0.9 237,032 - H281DRAFT_05047 0.66 -1.3 237,122 + H281DRAFT_05047 0.71 -0.8 237,153 + H281DRAFT_05047 0.73 -0.9 237,153 + H281DRAFT_05047 0.73 +0.4 237,153 + H281DRAFT_05047 0.73 -1.1 237,154 - H281DRAFT_05047 0.73 +2.1 237,154 - H281DRAFT_05047 0.73 +0.5 237,154 - H281DRAFT_05047 0.73 -0.1 237,154 - H281DRAFT_05047 0.73 +0.5 237,229 - H281DRAFT_05047 0.77 -0.4 237,229 - H281DRAFT_05047 0.77 -0.2 237,725 - +0.4 237,728 - +0.2 237,925 + H281DRAFT_05048 0.18 -0.7 237,926 - H281DRAFT_05048 0.18 +0.4 238,154 - H281DRAFT_05048 0.34 +0.2 238,154 - H281DRAFT_05048 0.34 +0.1 238,154 - H281DRAFT_05048 0.34 +0.8 238,207 + H281DRAFT_05048 0.38 +0.9 238,207 + H281DRAFT_05048 0.38 +0.0 238,208 - H281DRAFT_05048 0.38 +0.2 238,312 + -1.2 238,492 + H281DRAFT_05048 0.59 -0.2 238,569 + H281DRAFT_05048 0.64 -0.1
Or see this region's nucleotide sequence