Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04973 and H281DRAFT_04974 are separated by 336 nucleotides H281DRAFT_04974 and H281DRAFT_04975 are separated by 119 nucleotides
H281DRAFT_04973: H281DRAFT_04973 - Excinuclease ABC subunit B, at 155,788 to 157,881
_04973
H281DRAFT_04974: H281DRAFT_04974 - aromatic-amino-acid transaminase, at 158,218 to 159,417
_04974
H281DRAFT_04975: H281DRAFT_04975 - NTE family protein, at 159,537 to 160,775
_04975
Position (kb) 158
159
160 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 157.278 kb on - strand, within H281DRAFT_04973 at 157.383 kb on - strand, within H281DRAFT_04973 at 157.464 kb on + strand, within H281DRAFT_04973 at 157.465 kb on - strand, within H281DRAFT_04973 at 157.517 kb on + strand, within H281DRAFT_04973 at 157.517 kb on + strand, within H281DRAFT_04973 at 157.518 kb on - strand, within H281DRAFT_04973 at 157.518 kb on - strand, within H281DRAFT_04973 at 157.518 kb on - strand, within H281DRAFT_04973 at 157.533 kb on - strand, within H281DRAFT_04973 at 157.536 kb on - strand, within H281DRAFT_04973 at 157.541 kb on + strand, within H281DRAFT_04973 at 157.542 kb on - strand, within H281DRAFT_04973 at 157.545 kb on - strand, within H281DRAFT_04973 at 157.545 kb on - strand, within H281DRAFT_04973 at 157.556 kb on + strand, within H281DRAFT_04973 at 157.797 kb on - strand at 157.917 kb on - strand at 158.005 kb on + strand at 158.035 kb on + strand at 158.035 kb on + strand at 158.035 kb on + strand at 158.036 kb on - strand at 158.074 kb on + strand at 158.075 kb on - strand at 158.182 kb on + strand at 158.183 kb on - strand at 158.200 kb on + strand at 158.444 kb on - strand, within H281DRAFT_04974 at 158.668 kb on + strand, within H281DRAFT_04974 at 158.668 kb on + strand, within H281DRAFT_04974 at 158.669 kb on - strand, within H281DRAFT_04974 at 158.671 kb on + strand, within H281DRAFT_04974 at 158.728 kb on + strand, within H281DRAFT_04974 at 158.864 kb on - strand, within H281DRAFT_04974 at 159.027 kb on + strand, within H281DRAFT_04974 at 159.326 kb on - strand at 159.326 kb on - strand at 159.366 kb on + strand at 159.704 kb on - strand, within H281DRAFT_04975 at 159.739 kb on + strand, within H281DRAFT_04975 at 159.739 kb on + strand, within H281DRAFT_04975 at 159.890 kb on - strand, within H281DRAFT_04975 at 159.890 kb on - strand, within H281DRAFT_04975 at 160.012 kb on + strand, within H281DRAFT_04975 at 160.012 kb on + strand, within H281DRAFT_04975 at 160.051 kb on + strand, within H281DRAFT_04975 at 160.268 kb on - strand, within H281DRAFT_04975
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 157,278 - H281DRAFT_04973 0.71 -0.4 157,383 - H281DRAFT_04973 0.76 +0.2 157,464 + H281DRAFT_04973 0.80 +0.2 157,465 - H281DRAFT_04973 0.80 -1.0 157,517 + H281DRAFT_04973 0.83 +0.8 157,517 + H281DRAFT_04973 0.83 +1.3 157,518 - H281DRAFT_04973 0.83 +0.2 157,518 - H281DRAFT_04973 0.83 -0.5 157,518 - H281DRAFT_04973 0.83 -0.6 157,533 - H281DRAFT_04973 0.83 -0.6 157,536 - H281DRAFT_04973 0.83 -0.1 157,541 + H281DRAFT_04973 0.84 +0.1 157,542 - H281DRAFT_04973 0.84 +0.4 157,545 - H281DRAFT_04973 0.84 -0.4 157,545 - H281DRAFT_04973 0.84 -0.2 157,556 + H281DRAFT_04973 0.84 -0.2 157,797 - -0.8 157,917 - -0.1 158,005 + +0.0 158,035 + -0.3 158,035 + -0.1 158,035 + -1.0 158,036 - -1.4 158,074 + -1.1 158,075 - +0.6 158,182 + -0.5 158,183 - -3.4 158,200 + +1.1 158,444 - H281DRAFT_04974 0.19 -3.2 158,668 + H281DRAFT_04974 0.38 -2.2 158,668 + H281DRAFT_04974 0.38 -1.2 158,669 - H281DRAFT_04974 0.38 -4.5 158,671 + H281DRAFT_04974 0.38 -0.7 158,728 + H281DRAFT_04974 0.42 -3.9 158,864 - H281DRAFT_04974 0.54 -4.6 159,027 + H281DRAFT_04974 0.67 -4.3 159,326 - -3.9 159,326 - -2.1 159,366 + -1.1 159,704 - H281DRAFT_04975 0.13 +0.3 159,739 + H281DRAFT_04975 0.16 -0.1 159,739 + H281DRAFT_04975 0.16 +0.5 159,890 - H281DRAFT_04975 0.28 +0.5 159,890 - H281DRAFT_04975 0.28 -0.6 160,012 + H281DRAFT_04975 0.38 +0.0 160,012 + H281DRAFT_04975 0.38 -0.5 160,051 + H281DRAFT_04975 0.41 +0.6 160,268 - H281DRAFT_04975 0.59 +1.8
Or see this region's nucleotide sequence