Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04970 and H281DRAFT_04971 are separated by 79 nucleotides H281DRAFT_04971 and H281DRAFT_04972 are separated by 118 nucleotides H281DRAFT_04972 and H281DRAFT_04973 are separated by 348 nucleotides
H281DRAFT_04970: H281DRAFT_04970 - high-affinity iron transporter, at 153,515 to 154,360
_04970
H281DRAFT_04971: H281DRAFT_04971 - Predicted periplasmic lipoprotein involved in iron transport, at 154,440 to 154,772
_04971
H281DRAFT_04972: H281DRAFT_04972 - hypothetical protein, at 154,891 to 155,439
_04972
H281DRAFT_04973: H281DRAFT_04973 - Excinuclease ABC subunit B, at 155,788 to 157,881
_04973
Position (kb) 154
155
156 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 154.246 kb on - strand, within H281DRAFT_04970 at 154.346 kb on + strand at 154.347 kb on - strand at 154.347 kb on - strand at 154.442 kb on - strand at 154.607 kb on + strand, within H281DRAFT_04971 at 154.608 kb on - strand, within H281DRAFT_04971 at 154.608 kb on - strand, within H281DRAFT_04971 at 154.608 kb on - strand, within H281DRAFT_04971 at 154.626 kb on - strand, within H281DRAFT_04971 at 154.626 kb on - strand, within H281DRAFT_04971 at 154.857 kb on - strand at 154.926 kb on + strand at 154.926 kb on + strand at 154.934 kb on + strand at 155.048 kb on + strand, within H281DRAFT_04972 at 155.048 kb on + strand, within H281DRAFT_04972 at 155.049 kb on - strand, within H281DRAFT_04972 at 155.177 kb on + strand, within H281DRAFT_04972 at 155.178 kb on - strand, within H281DRAFT_04972 at 155.562 kb on - strand at 155.587 kb on + strand at 155.607 kb on + strand at 155.608 kb on - strand at 155.623 kb on + strand at 155.624 kb on - strand at 155.624 kb on - strand at 155.635 kb on - strand at 155.655 kb on - strand at 156.020 kb on + strand, within H281DRAFT_04973 at 156.020 kb on + strand, within H281DRAFT_04973 at 156.020 kb on + strand, within H281DRAFT_04973 at 156.020 kb on + strand, within H281DRAFT_04973 at 156.021 kb on - strand, within H281DRAFT_04973 at 156.021 kb on - strand, within H281DRAFT_04973 at 156.021 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 154,246 - H281DRAFT_04970 0.86 +0.4 154,346 + -0.5 154,347 - -0.6 154,347 - -0.6 154,442 - +0.2 154,607 + H281DRAFT_04971 0.50 +0.1 154,608 - H281DRAFT_04971 0.50 -1.3 154,608 - H281DRAFT_04971 0.50 -0.4 154,608 - H281DRAFT_04971 0.50 +0.8 154,626 - H281DRAFT_04971 0.56 -0.1 154,626 - H281DRAFT_04971 0.56 -1.9 154,857 - -0.5 154,926 + -1.2 154,926 + -0.6 154,934 + -1.0 155,048 + H281DRAFT_04972 0.29 -0.3 155,048 + H281DRAFT_04972 0.29 -1.4 155,049 - H281DRAFT_04972 0.29 -0.6 155,177 + H281DRAFT_04972 0.52 -1.9 155,178 - H281DRAFT_04972 0.52 -1.1 155,562 - -0.5 155,587 + -1.8 155,607 + -1.6 155,608 - -0.2 155,623 + -0.3 155,624 - -0.2 155,624 - +0.2 155,635 - -0.3 155,655 - +0.8 156,020 + H281DRAFT_04973 0.11 -1.6 156,020 + H281DRAFT_04973 0.11 -0.6 156,020 + H281DRAFT_04973 0.11 -0.3 156,020 + H281DRAFT_04973 0.11 +0.5 156,021 - H281DRAFT_04973 0.11 -2.9 156,021 - H281DRAFT_04973 0.11 -0.4 156,021 - +0.8
Or see this region's nucleotide sequence