Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04880

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04879 and H281DRAFT_04880 are separated by 466 nucleotidesH281DRAFT_04880 and H281DRAFT_04881 overlap by 4 nucleotides H281DRAFT_04879: H281DRAFT_04879 - putative MFS transporter, AGZA family, xanthine/uracil permease, at 22,210 to 23,592 _04879 H281DRAFT_04880: H281DRAFT_04880 - PRC-barrel domain-containing protein, at 24,059 to 25,033 _04880 H281DRAFT_04881: H281DRAFT_04881 - Predicted arabinose efflux permease, MFS family, at 25,030 to 26,286 _04881 Position (kb) 24 25 26Strain fitness (log2 ratio) -2 -1 0 1 2 3at 23.438 kb on + strand, within H281DRAFT_04879at 23.516 kb on + strandat 23.774 kb on + strandat 23.775 kb on - strandat 23.775 kb on - strandat 23.775 kb on - strandat 23.776 kb on + strandat 24.012 kb on + strandat 24.412 kb on + strand, within H281DRAFT_04880at 24.412 kb on + strand, within H281DRAFT_04880at 24.412 kb on + strand, within H281DRAFT_04880at 25.136 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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23,438 + H281DRAFT_04879 0.89 -1.2
23,516 + -1.7
23,774 + +0.2
23,775 - -1.1
23,775 - +2.0
23,775 - +0.4
23,776 + -2.2
24,012 + +0.1
24,412 + H281DRAFT_04880 0.36 +0.5
24,412 + H281DRAFT_04880 0.36 +0.5
24,412 + H281DRAFT_04880 0.36 +2.8
25,136 - -0.2

Or see this region's nucleotide sequence