Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04804 and H281DRAFT_04805 are separated by 130 nucleotides H281DRAFT_04805 and H281DRAFT_04806 are separated by 287 nucleotides
H281DRAFT_04804: H281DRAFT_04804 - hypothetical protein, at 237,984 to 239,099
_04804
H281DRAFT_04805: H281DRAFT_04805 - methyltransferase, FkbM family, at 239,230 to 240,135
_04805
H281DRAFT_04806: H281DRAFT_04806 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 240,423 to 241,955
_04806
Position (kb) 239
240
241 Strain fitness (log2 ratio) -1
0
1
2 at 238.290 kb on + strand, within H281DRAFT_04804 at 238.290 kb on + strand, within H281DRAFT_04804 at 238.337 kb on - strand, within H281DRAFT_04804 at 238.337 kb on - strand, within H281DRAFT_04804 at 238.359 kb on - strand, within H281DRAFT_04804 at 238.470 kb on + strand, within H281DRAFT_04804 at 238.548 kb on + strand, within H281DRAFT_04804 at 238.577 kb on + strand, within H281DRAFT_04804 at 238.577 kb on + strand, within H281DRAFT_04804 at 238.654 kb on - strand, within H281DRAFT_04804 at 239.067 kb on - strand at 239.125 kb on - strand at 239.144 kb on + strand at 239.163 kb on + strand at 239.231 kb on + strand at 239.393 kb on + strand, within H281DRAFT_04805 at 239.526 kb on - strand, within H281DRAFT_04805 at 239.900 kb on + strand, within H281DRAFT_04805 at 240.086 kb on + strand at 240.112 kb on - strand at 240.294 kb on + strand at 240.356 kb on + strand at 240.357 kb on - strand at 240.357 kb on - strand at 240.357 kb on - strand at 240.358 kb on + strand at 240.731 kb on + strand, within H281DRAFT_04806 at 240.731 kb on + strand, within H281DRAFT_04806 at 240.732 kb on - strand, within H281DRAFT_04806
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 238,290 + H281DRAFT_04804 0.27 +0.6 238,290 + H281DRAFT_04804 0.27 +0.5 238,337 - H281DRAFT_04804 0.32 -0.1 238,337 - H281DRAFT_04804 0.32 +1.3 238,359 - H281DRAFT_04804 0.34 +1.2 238,470 + H281DRAFT_04804 0.44 +0.9 238,548 + H281DRAFT_04804 0.51 +0.9 238,577 + H281DRAFT_04804 0.53 +0.5 238,577 + H281DRAFT_04804 0.53 +0.4 238,654 - H281DRAFT_04804 0.60 +1.0 239,067 - -0.5 239,125 - +0.3 239,144 + +0.6 239,163 + -0.2 239,231 + +0.3 239,393 + H281DRAFT_04805 0.18 -1.3 239,526 - H281DRAFT_04805 0.33 +0.9 239,900 + H281DRAFT_04805 0.74 +0.2 240,086 + +1.6 240,112 - +1.4 240,294 + +2.0 240,356 + -0.0 240,357 - +0.1 240,357 - -0.8 240,357 - +0.2 240,358 + -0.5 240,731 + H281DRAFT_04806 0.20 -0.1 240,731 + H281DRAFT_04806 0.20 +1.9 240,732 - H281DRAFT_04806 0.20 -1.7
Or see this region's nucleotide sequence