Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04802 and H281DRAFT_04803 are separated by 183 nucleotides H281DRAFT_04803 and H281DRAFT_04804 are separated by 856 nucleotides
H281DRAFT_04802: H281DRAFT_04802 - negative transcriptional regulator, PaiB family, at 234,746 to 235,381
_04802
H281DRAFT_04803: H281DRAFT_04803 - hypothetical protein, at 235,565 to 237,127
_04803
H281DRAFT_04804: H281DRAFT_04804 - hypothetical protein, at 237,984 to 239,099
_04804
Position (kb) 235
236
237
238 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 234.583 kb on - strand at 234.929 kb on - strand, within H281DRAFT_04802 at 235.129 kb on + strand, within H281DRAFT_04802 at 235.160 kb on + strand, within H281DRAFT_04802 at 235.377 kb on + strand at 235.627 kb on + strand at 235.739 kb on - strand, within H281DRAFT_04803 at 235.739 kb on - strand, within H281DRAFT_04803 at 235.739 kb on - strand, within H281DRAFT_04803 at 235.744 kb on - strand, within H281DRAFT_04803 at 235.744 kb on - strand, within H281DRAFT_04803 at 235.887 kb on + strand, within H281DRAFT_04803 at 235.887 kb on + strand, within H281DRAFT_04803 at 235.888 kb on - strand, within H281DRAFT_04803 at 235.896 kb on + strand, within H281DRAFT_04803 at 235.897 kb on - strand, within H281DRAFT_04803 at 235.897 kb on - strand, within H281DRAFT_04803 at 235.897 kb on - strand, within H281DRAFT_04803 at 236.178 kb on + strand, within H281DRAFT_04803 at 236.233 kb on - strand, within H281DRAFT_04803 at 236.321 kb on - strand, within H281DRAFT_04803 at 236.398 kb on - strand, within H281DRAFT_04803 at 236.448 kb on + strand, within H281DRAFT_04803 at 236.449 kb on - strand, within H281DRAFT_04803 at 236.522 kb on - strand, within H281DRAFT_04803 at 236.586 kb on + strand, within H281DRAFT_04803 at 236.586 kb on + strand, within H281DRAFT_04803 at 236.625 kb on + strand, within H281DRAFT_04803 at 236.625 kb on + strand, within H281DRAFT_04803 at 236.625 kb on + strand, within H281DRAFT_04803 at 236.729 kb on - strand, within H281DRAFT_04803 at 236.768 kb on - strand, within H281DRAFT_04803 at 236.796 kb on + strand, within H281DRAFT_04803 at 236.797 kb on - strand, within H281DRAFT_04803 at 236.797 kb on - strand, within H281DRAFT_04803 at 236.862 kb on + strand, within H281DRAFT_04803 at 236.862 kb on + strand, within H281DRAFT_04803 at 236.862 kb on + strand, within H281DRAFT_04803 at 236.863 kb on - strand, within H281DRAFT_04803 at 237.073 kb on + strand at 237.182 kb on + strand at 237.262 kb on + strand at 237.310 kb on + strand at 237.610 kb on - strand at 237.708 kb on + strand at 237.812 kb on + strand at 237.812 kb on + strand at 237.812 kb on + strand at 237.813 kb on - strand at 237.861 kb on + strand at 238.108 kb on + strand, within H281DRAFT_04804 at 238.108 kb on + strand, within H281DRAFT_04804 at 238.108 kb on + strand, within H281DRAFT_04804 at 238.108 kb on + strand, within H281DRAFT_04804 at 238.112 kb on + strand, within H281DRAFT_04804 at 238.112 kb on + strand, within H281DRAFT_04804 at 238.113 kb on - strand, within H281DRAFT_04804
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 234,583 - -0.1 234,929 - H281DRAFT_04802 0.29 -2.0 235,129 + H281DRAFT_04802 0.60 +0.8 235,160 + H281DRAFT_04802 0.65 +0.4 235,377 + +0.4 235,627 + +0.7 235,739 - H281DRAFT_04803 0.11 -0.1 235,739 - H281DRAFT_04803 0.11 +0.1 235,739 - H281DRAFT_04803 0.11 -0.5 235,744 - H281DRAFT_04803 0.11 +0.2 235,744 - H281DRAFT_04803 0.11 +0.1 235,887 + H281DRAFT_04803 0.21 -1.5 235,887 + H281DRAFT_04803 0.21 +0.5 235,888 - H281DRAFT_04803 0.21 -0.0 235,896 + H281DRAFT_04803 0.21 +0.6 235,897 - H281DRAFT_04803 0.21 -1.0 235,897 - H281DRAFT_04803 0.21 +0.1 235,897 - H281DRAFT_04803 0.21 -1.3 236,178 + H281DRAFT_04803 0.39 -0.3 236,233 - H281DRAFT_04803 0.43 -1.6 236,321 - H281DRAFT_04803 0.48 -0.5 236,398 - H281DRAFT_04803 0.53 -0.1 236,448 + H281DRAFT_04803 0.56 -0.2 236,449 - H281DRAFT_04803 0.57 -0.4 236,522 - H281DRAFT_04803 0.61 -0.2 236,586 + H281DRAFT_04803 0.65 -0.5 236,586 + H281DRAFT_04803 0.65 -0.4 236,625 + H281DRAFT_04803 0.68 -0.8 236,625 + H281DRAFT_04803 0.68 +0.8 236,625 + H281DRAFT_04803 0.68 -0.2 236,729 - H281DRAFT_04803 0.74 +1.3 236,768 - H281DRAFT_04803 0.77 -0.6 236,796 + H281DRAFT_04803 0.79 -0.1 236,797 - H281DRAFT_04803 0.79 +0.4 236,797 - H281DRAFT_04803 0.79 +0.0 236,862 + H281DRAFT_04803 0.83 +0.4 236,862 + H281DRAFT_04803 0.83 -0.7 236,862 + H281DRAFT_04803 0.83 -0.1 236,863 - H281DRAFT_04803 0.83 +0.5 237,073 + -0.4 237,182 + -0.6 237,262 + -0.3 237,310 + +1.1 237,610 - -1.3 237,708 + +0.2 237,812 + +0.2 237,812 + +0.4 237,812 + +1.2 237,813 - -0.8 237,861 + +0.0 238,108 + H281DRAFT_04804 0.11 +0.4 238,108 + H281DRAFT_04804 0.11 +1.1 238,108 + H281DRAFT_04804 0.11 +0.4 238,108 + H281DRAFT_04804 0.11 -0.1 238,112 + H281DRAFT_04804 0.11 +0.3 238,112 + H281DRAFT_04804 0.11 +3.3 238,113 - H281DRAFT_04804 0.12 +1.1
Or see this region's nucleotide sequence