Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04792

Experiment: 2'-Deoxyinosine 5 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04792 and H281DRAFT_04793 are separated by 58 nucleotides H281DRAFT_04792: H281DRAFT_04792 - Glycosyltransferase involved in cell wall bisynthesis, at 219,969 to 221,075 _04792 H281DRAFT_04793: H281DRAFT_04793 - Glycosyltransferase, at 221,134 to 222,075 _04793 Position (kb) 219 220 221 222Strain fitness (log2 ratio) -1 0 1 2 3at 219.094 kb on + strandat 219.099 kb on - strandat 219.200 kb on - strandat 219.217 kb on + strandat 219.218 kb on - strandat 219.224 kb on - strandat 219.224 kb on - strandat 219.257 kb on + strandat 219.376 kb on - strandat 219.408 kb on - strandat 219.459 kb on - strandat 220.184 kb on - strand, within H281DRAFT_04792at 220.742 kb on - strand, within H281DRAFT_04792at 220.980 kb on + strandat 221.153 kb on + strandat 221.302 kb on + strand, within H281DRAFT_04793at 222.040 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C)
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219,094 + -0.5
219,099 - -0.2
219,200 - +1.2
219,217 + +0.2
219,218 - +2.8
219,224 - -1.2
219,224 - -0.1
219,257 + +0.9
219,376 - +1.4
219,408 - +0.8
219,459 - -1.0
220,184 - H281DRAFT_04792 0.19 +3.2
220,742 - H281DRAFT_04792 0.70 -0.1
220,980 + +0.8
221,153 + -1.0
221,302 + H281DRAFT_04793 0.18 +0.3
222,040 - +0.1

Or see this region's nucleotide sequence