Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04717 and H281DRAFT_04718 are separated by 19 nucleotides H281DRAFT_04718 and H281DRAFT_04719 are separated by 31 nucleotides H281DRAFT_04719 and H281DRAFT_04720 are separated by 137 nucleotides
H281DRAFT_04717: H281DRAFT_04717 - tol-pal system protein YbgF, at 130,280 to 131,029
_04717
H281DRAFT_04718: H281DRAFT_04718 - peptidoglycan-associated lipoprotein, at 131,049 to 131,558
_04718
H281DRAFT_04719: H281DRAFT_04719 - TolB protein, at 131,590 to 132,882
_04719
H281DRAFT_04720: H281DRAFT_04720 - Cell division and transport-associated protein TolA, at 133,020 to 134,048
_04720
Position (kb) 131
132
133 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 130.731 kb on + strand, within H281DRAFT_04717 at 130.735 kb on - strand, within H281DRAFT_04717 at 131.050 kb on + strand at 131.051 kb on - strand at 131.051 kb on - strand at 131.051 kb on - strand at 131.344 kb on + strand, within H281DRAFT_04718 at 131.345 kb on - strand, within H281DRAFT_04718 at 131.345 kb on - strand, within H281DRAFT_04718 at 131.592 kb on - strand at 131.624 kb on - strand at 131.810 kb on + strand, within H281DRAFT_04719 at 131.842 kb on - strand, within H281DRAFT_04719 at 131.951 kb on + strand, within H281DRAFT_04719 at 131.988 kb on - strand, within H281DRAFT_04719 at 132.216 kb on - strand, within H281DRAFT_04719 at 132.248 kb on + strand, within H281DRAFT_04719 at 132.381 kb on - strand, within H281DRAFT_04719 at 132.428 kb on + strand, within H281DRAFT_04719 at 132.430 kb on + strand, within H281DRAFT_04719 at 132.430 kb on + strand, within H281DRAFT_04719 at 132.431 kb on - strand, within H281DRAFT_04719 at 132.888 kb on - strand at 132.914 kb on + strand at 132.951 kb on - strand at 133.005 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 130,731 + H281DRAFT_04717 0.60 -0.3 130,735 - H281DRAFT_04717 0.61 -0.6 131,050 + +1.0 131,051 - +0.3 131,051 - -0.0 131,051 - -0.3 131,344 + H281DRAFT_04718 0.58 -0.5 131,345 - H281DRAFT_04718 0.58 -2.8 131,345 - H281DRAFT_04718 0.58 +1.0 131,592 - +1.0 131,624 - -1.3 131,810 + H281DRAFT_04719 0.17 -0.8 131,842 - H281DRAFT_04719 0.19 +0.0 131,951 + H281DRAFT_04719 0.28 +1.0 131,988 - H281DRAFT_04719 0.31 -2.3 132,216 - H281DRAFT_04719 0.48 +0.4 132,248 + H281DRAFT_04719 0.51 -1.5 132,381 - H281DRAFT_04719 0.61 -0.6 132,428 + H281DRAFT_04719 0.65 -0.8 132,430 + H281DRAFT_04719 0.65 -2.8 132,430 + H281DRAFT_04719 0.65 -2.0 132,431 - H281DRAFT_04719 0.65 -2.1 132,888 - -0.7 132,914 + -1.0 132,951 - +1.2 133,005 - +1.2
Or see this region's nucleotide sequence