Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04702 and H281DRAFT_04703 are separated by 47 nucleotides H281DRAFT_04703 and H281DRAFT_04704 are separated by 29 nucleotides H281DRAFT_04704 and H281DRAFT_04705 overlap by 4 nucleotides
H281DRAFT_04702: H281DRAFT_04702 - para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase, at 114,698 to 116,587
_04702
H281DRAFT_04703: H281DRAFT_04703 - ketopantoate hydroxymethyltransferase, at 116,635 to 117,450
_04703
H281DRAFT_04704: H281DRAFT_04704 - Deoxyadenosine/deoxycytidine kinase, at 117,480 to 118,160
_04704
H281DRAFT_04705: H281DRAFT_04705 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, at 118,157 to 118,690
_04705
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 115.700 kb on + strand, within H281DRAFT_04702 at 115.851 kb on + strand, within H281DRAFT_04702 at 115.852 kb on - strand, within H281DRAFT_04702 at 115.852 kb on - strand, within H281DRAFT_04702 at 115.964 kb on + strand, within H281DRAFT_04702 at 115.964 kb on + strand, within H281DRAFT_04702 at 115.964 kb on + strand, within H281DRAFT_04702 at 115.965 kb on - strand, within H281DRAFT_04702 at 116.038 kb on - strand, within H281DRAFT_04702 at 116.134 kb on - strand, within H281DRAFT_04702 at 116.250 kb on + strand, within H281DRAFT_04702 at 116.251 kb on - strand, within H281DRAFT_04702 at 116.251 kb on - strand, within H281DRAFT_04702 at 116.251 kb on - strand, within H281DRAFT_04702 at 116.329 kb on + strand, within H281DRAFT_04702 at 116.329 kb on + strand, within H281DRAFT_04702 at 116.330 kb on - strand, within H281DRAFT_04702 at 116.330 kb on - strand, within H281DRAFT_04702 at 116.330 kb on - strand, within H281DRAFT_04702 at 116.383 kb on - strand, within H281DRAFT_04702 at 116.476 kb on + strand at 116.476 kb on + strand at 116.477 kb on - strand at 116.517 kb on + strand at 116.518 kb on - strand at 116.518 kb on - strand at 116.518 kb on - strand at 116.518 kb on - strand at 116.688 kb on - strand at 117.444 kb on - strand at 117.626 kb on - strand, within H281DRAFT_04704 at 117.640 kb on + strand at 117.641 kb on - strand, within H281DRAFT_04704 at 117.664 kb on + strand, within H281DRAFT_04704 at 117.665 kb on - strand, within H281DRAFT_04704 at 117.965 kb on - strand, within H281DRAFT_04704 at 118.086 kb on - strand, within H281DRAFT_04704 at 118.086 kb on - strand, within H281DRAFT_04704 at 118.086 kb on - strand, within H281DRAFT_04704
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 115,700 + H281DRAFT_04702 0.53 +1.0 115,851 + H281DRAFT_04702 0.61 +0.4 115,852 - H281DRAFT_04702 0.61 -1.7 115,852 - H281DRAFT_04702 0.61 -0.2 115,964 + H281DRAFT_04702 0.67 +2.8 115,964 + H281DRAFT_04702 0.67 +0.3 115,964 + H281DRAFT_04702 0.67 -0.7 115,965 - H281DRAFT_04702 0.67 +0.0 116,038 - H281DRAFT_04702 0.71 -0.7 116,134 - H281DRAFT_04702 0.76 +0.9 116,250 + H281DRAFT_04702 0.82 -0.3 116,251 - H281DRAFT_04702 0.82 -0.6 116,251 - H281DRAFT_04702 0.82 -0.3 116,251 - H281DRAFT_04702 0.82 -0.2 116,329 + H281DRAFT_04702 0.86 +0.3 116,329 + H281DRAFT_04702 0.86 +1.3 116,330 - H281DRAFT_04702 0.86 +0.3 116,330 - H281DRAFT_04702 0.86 -1.3 116,330 - H281DRAFT_04702 0.86 +0.3 116,383 - H281DRAFT_04702 0.89 +0.7 116,476 + -1.3 116,476 + +0.6 116,477 - -2.0 116,517 + +0.1 116,518 - +0.8 116,518 - -0.5 116,518 - -0.7 116,518 - +1.8 116,688 - +1.0 117,444 - -0.2 117,626 - H281DRAFT_04704 0.21 -0.2 117,640 + +3.0 117,641 - H281DRAFT_04704 0.24 +0.5 117,664 + H281DRAFT_04704 0.27 +0.9 117,665 - H281DRAFT_04704 0.27 -3.1 117,965 - H281DRAFT_04704 0.71 +1.0 118,086 - H281DRAFT_04704 0.89 +0.5 118,086 - H281DRAFT_04704 0.89 -0.0 118,086 - H281DRAFT_04704 0.89 +2.1
Or see this region's nucleotide sequence