Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04455 and H281DRAFT_04456 are separated by 106 nucleotides H281DRAFT_04456 and H281DRAFT_04457 overlap by 4 nucleotides H281DRAFT_04457 and H281DRAFT_04458 are separated by 10 nucleotides
H281DRAFT_04455: H281DRAFT_04455 - Protein of unknown function (DUF2993), at 175,824 to 178,043
_04455
H281DRAFT_04456: H281DRAFT_04456 - 5-deoxyglucuronate isomerase, at 178,150 to 178,950
_04456
H281DRAFT_04457: H281DRAFT_04457 - 2-keto-myo-inositol dehydratase, at 178,947 to 179,897
_04457
H281DRAFT_04458: H281DRAFT_04458 - 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, at 179,908 to 181,893
_04458
Position (kb) 178
179 Strain fitness (log2 ratio) -1
0
1
2 at 177.228 kb on + strand, within H281DRAFT_04455 at 177.228 kb on + strand, within H281DRAFT_04455 at 177.229 kb on - strand, within H281DRAFT_04455 at 177.229 kb on - strand, within H281DRAFT_04455 at 177.409 kb on - strand, within H281DRAFT_04455 at 177.596 kb on - strand, within H281DRAFT_04455 at 177.773 kb on - strand, within H281DRAFT_04455 at 177.954 kb on + strand at 178.239 kb on - strand, within H281DRAFT_04456 at 178.392 kb on - strand, within H281DRAFT_04456 at 178.394 kb on + strand, within H281DRAFT_04456 at 178.395 kb on - strand, within H281DRAFT_04456 at 178.455 kb on - strand, within H281DRAFT_04456 at 178.537 kb on + strand, within H281DRAFT_04456 at 178.538 kb on - strand, within H281DRAFT_04456 at 178.542 kb on - strand, within H281DRAFT_04456 at 178.900 kb on - strand at 178.942 kb on + strand at 178.943 kb on - strand at 179.056 kb on + strand, within H281DRAFT_04457 at 179.414 kb on - strand, within H281DRAFT_04457 at 179.434 kb on + strand, within H281DRAFT_04457 at 179.435 kb on - strand, within H281DRAFT_04457 at 179.463 kb on - strand, within H281DRAFT_04457 at 179.581 kb on + strand, within H281DRAFT_04457 at 179.880 kb on + strand at 179.880 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 177,228 + H281DRAFT_04455 0.63 -0.6 177,228 + H281DRAFT_04455 0.63 -0.6 177,229 - H281DRAFT_04455 0.63 -0.2 177,229 - H281DRAFT_04455 0.63 +1.9 177,409 - H281DRAFT_04455 0.71 +0.1 177,596 - H281DRAFT_04455 0.80 -0.2 177,773 - H281DRAFT_04455 0.88 +0.7 177,954 + +0.8 178,239 - H281DRAFT_04456 0.11 -0.8 178,392 - H281DRAFT_04456 0.30 +2.1 178,394 + H281DRAFT_04456 0.30 +0.3 178,395 - H281DRAFT_04456 0.31 +1.7 178,455 - H281DRAFT_04456 0.38 +0.8 178,537 + H281DRAFT_04456 0.48 +0.2 178,538 - H281DRAFT_04456 0.48 +1.8 178,542 - H281DRAFT_04456 0.49 +0.7 178,900 - +0.1 178,942 + +0.2 178,943 - +0.9 179,056 + H281DRAFT_04457 0.11 -1.7 179,414 - H281DRAFT_04457 0.49 -0.3 179,434 + H281DRAFT_04457 0.51 +0.1 179,435 - H281DRAFT_04457 0.51 +1.8 179,463 - H281DRAFT_04457 0.54 -0.5 179,581 + H281DRAFT_04457 0.67 -0.6 179,880 + -0.2 179,880 + +0.3
Or see this region's nucleotide sequence