Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04421 and H281DRAFT_04422 are separated by 255 nucleotides H281DRAFT_04422 and H281DRAFT_04423 are separated by 73 nucleotides H281DRAFT_04423 and H281DRAFT_04424 are separated by 379 nucleotides H281DRAFT_04424 and H281DRAFT_04425 are separated by 235 nucleotides H281DRAFT_04425 and H281DRAFT_04426 are separated by 31 nucleotides
H281DRAFT_04421: H281DRAFT_04421 - phosphohistidine phosphatase, SixA, at 142,236 to 142,694
_04421
H281DRAFT_04422: H281DRAFT_04422 - tRNA_Pro_TGG, at 142,950 to 143,026
_04422
H281DRAFT_04423: H281DRAFT_04423 - Protein of unknown function (DUF3309), at 143,100 to 143,258
_04423
H281DRAFT_04424: H281DRAFT_04424 - hypothetical protein, at 143,638 to 143,814
_04424
H281DRAFT_04425: H281DRAFT_04425 - hypothetical protein, at 144,050 to 144,217
_04425
H281DRAFT_04426: H281DRAFT_04426 - multidrug resistance protein, MATE family, at 144,249 to 145,601
_04426
Position (kb)
143
144 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 143.053 kb on - strand at 143.093 kb on - strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.103 kb on + strand at 143.104 kb on - strand at 143.390 kb on + strand at 143.398 kb on + strand at 143.398 kb on + strand at 143.399 kb on - strand at 143.399 kb on - strand at 143.726 kb on + strand, within H281DRAFT_04424 at 143.726 kb on + strand, within H281DRAFT_04424 at 143.727 kb on - strand, within H281DRAFT_04424 at 143.727 kb on - strand, within H281DRAFT_04424 at 143.846 kb on + strand at 143.846 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.848 kb on + strand at 143.849 kb on - strand at 143.849 kb on - strand at 143.849 kb on - strand at 143.849 kb on - strand at 143.851 kb on + strand at 143.851 kb on + strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.852 kb on - strand at 143.918 kb on - strand at 144.155 kb on + strand, within H281DRAFT_04425 at 144.251 kb on - strand at 144.353 kb on - strand at 144.463 kb on + strand, within H281DRAFT_04426 at 144.464 kb on - strand, within H281DRAFT_04426 at 144.464 kb on - strand, within H281DRAFT_04426 at 144.508 kb on + strand, within H281DRAFT_04426 at 144.580 kb on + strand, within H281DRAFT_04426 at 144.581 kb on - strand, within H281DRAFT_04426 at 144.627 kb on - strand, within H281DRAFT_04426 at 144.722 kb on - strand, within H281DRAFT_04426
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 143,053 - -2.0 143,093 - +0.5 143,103 + +0.2 143,103 + +0.4 143,103 + +1.1 143,103 + -0.1 143,103 + -0.3 143,104 - +0.5 143,390 + +0.6 143,398 + -0.0 143,398 + +1.2 143,399 - -0.2 143,399 - -0.4 143,726 + H281DRAFT_04424 0.50 +1.1 143,726 + H281DRAFT_04424 0.50 -0.2 143,727 - H281DRAFT_04424 0.50 +0.1 143,727 - H281DRAFT_04424 0.50 +1.0 143,846 + +0.2 143,846 + +0.2 143,848 + -0.0 143,848 + -0.2 143,848 + +0.3 143,848 + -1.3 143,848 + +0.6 143,849 - -0.3 143,849 - +0.3 143,849 - -0.3 143,849 - +0.4 143,851 + -0.2 143,851 + -0.1 143,852 - +0.0 143,852 - +0.1 143,852 - +0.2 143,852 - +0.7 143,852 - +2.5 143,918 - -0.1 144,155 + H281DRAFT_04425 0.62 -0.5 144,251 - +0.2 144,353 - +0.4 144,463 + H281DRAFT_04426 0.16 +1.1 144,464 - H281DRAFT_04426 0.16 -0.2 144,464 - H281DRAFT_04426 0.16 -0.3 144,508 + H281DRAFT_04426 0.19 +0.2 144,580 + H281DRAFT_04426 0.24 +0.7 144,581 - H281DRAFT_04426 0.25 +0.7 144,627 - H281DRAFT_04426 0.28 +1.5 144,722 - H281DRAFT_04426 0.35 -0.9
Or see this region's nucleotide sequence