Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04384 and H281DRAFT_04385 are separated by 77 nucleotides H281DRAFT_04385 and H281DRAFT_04386 are separated by 18 nucleotides H281DRAFT_04386 and H281DRAFT_04387 are separated by 32 nucleotides
H281DRAFT_04384: H281DRAFT_04384 - ElaA protein, at 98,163 to 98,675
_04384
H281DRAFT_04385: H281DRAFT_04385 - putative membrane protein, at 98,753 to 99,649
_04385
H281DRAFT_04386: H281DRAFT_04386 - hypothetical protein, at 99,668 to 100,117
_04386
H281DRAFT_04387: H281DRAFT_04387 - protein SCO1/2, at 100,150 to 100,707
_04387
Position (kb) 99
100
101 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 99.003 kb on + strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.237 kb on + strand, within H281DRAFT_04385 at 99.237 kb on + strand, within H281DRAFT_04385 at 99.237 kb on + strand, within H281DRAFT_04385 at 99.303 kb on - strand, within H281DRAFT_04385 at 99.468 kb on + strand, within H281DRAFT_04385 at 99.495 kb on + strand, within H281DRAFT_04385 at 99.495 kb on + strand, within H281DRAFT_04385 at 99.496 kb on - strand, within H281DRAFT_04385 at 99.496 kb on - strand, within H281DRAFT_04385 at 99.496 kb on - strand, within H281DRAFT_04385 at 99.496 kb on - strand, within H281DRAFT_04385 at 99.669 kb on + strand at 99.669 kb on + strand at 99.669 kb on + strand at 99.670 kb on - strand at 99.670 kb on - strand at 99.670 kb on - strand at 99.670 kb on - strand at 99.746 kb on + strand, within H281DRAFT_04386 at 99.746 kb on + strand, within H281DRAFT_04386 at 99.746 kb on + strand at 99.747 kb on - strand, within H281DRAFT_04386 at 99.975 kb on + strand, within H281DRAFT_04386 at 100.111 kb on + strand at 100.111 kb on + strand at 100.112 kb on - strand at 100.253 kb on + strand, within H281DRAFT_04387 at 100.253 kb on + strand, within H281DRAFT_04387 at 100.254 kb on - strand, within H281DRAFT_04387 at 100.254 kb on - strand, within H281DRAFT_04387 at 100.266 kb on + strand, within H281DRAFT_04387 at 100.266 kb on + strand at 100.266 kb on + strand, within H281DRAFT_04387 at 100.267 kb on - strand, within H281DRAFT_04387 at 100.267 kb on - strand, within H281DRAFT_04387 at 100.267 kb on - strand, within H281DRAFT_04387 at 100.280 kb on + strand, within H281DRAFT_04387 at 100.280 kb on + strand, within H281DRAFT_04387 at 100.404 kb on - strand, within H281DRAFT_04387 at 100.556 kb on + strand, within H281DRAFT_04387 at 100.825 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 99,003 + H281DRAFT_04385 0.28 +0.3 99,006 - H281DRAFT_04385 0.28 -0.4 99,006 - H281DRAFT_04385 0.28 +1.3 99,006 - H281DRAFT_04385 0.28 -0.8 99,006 - H281DRAFT_04385 0.28 -1.0 99,006 - H281DRAFT_04385 0.28 +0.1 99,006 - H281DRAFT_04385 0.28 +1.1 99,237 + H281DRAFT_04385 0.54 +1.2 99,237 + H281DRAFT_04385 0.54 +0.9 99,237 + H281DRAFT_04385 0.54 -0.1 99,303 - H281DRAFT_04385 0.61 +0.1 99,468 + H281DRAFT_04385 0.80 -0.1 99,495 + H281DRAFT_04385 0.83 -0.8 99,495 + H281DRAFT_04385 0.83 +0.3 99,496 - H281DRAFT_04385 0.83 +0.4 99,496 - H281DRAFT_04385 0.83 +0.3 99,496 - H281DRAFT_04385 0.83 +0.5 99,496 - H281DRAFT_04385 0.83 -0.4 99,669 + -0.7 99,669 + +1.3 99,669 + +0.1 99,670 - -0.2 99,670 - +0.4 99,670 - -0.8 99,670 - +0.5 99,746 + H281DRAFT_04386 0.17 +0.5 99,746 + H281DRAFT_04386 0.17 +0.1 99,746 + -0.6 99,747 - H281DRAFT_04386 0.18 +1.1 99,975 + H281DRAFT_04386 0.68 +1.6 100,111 + +0.5 100,111 + -0.3 100,112 - +0.2 100,253 + H281DRAFT_04387 0.18 +3.8 100,253 + H281DRAFT_04387 0.18 +1.5 100,254 - H281DRAFT_04387 0.19 -1.1 100,254 - H281DRAFT_04387 0.19 -0.5 100,266 + H281DRAFT_04387 0.21 +2.3 100,266 + +1.9 100,266 + H281DRAFT_04387 0.21 +1.7 100,267 - H281DRAFT_04387 0.21 +1.1 100,267 - H281DRAFT_04387 0.21 +0.8 100,267 - H281DRAFT_04387 0.21 +0.3 100,280 + H281DRAFT_04387 0.23 +1.0 100,280 + H281DRAFT_04387 0.23 +0.5 100,404 - H281DRAFT_04387 0.46 -0.2 100,556 + H281DRAFT_04387 0.73 -2.8 100,825 + +0.0
Or see this region's nucleotide sequence