Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04382 and H281DRAFT_04383 are separated by 132 nucleotides H281DRAFT_04383 and H281DRAFT_04384 are separated by 88 nucleotides H281DRAFT_04384 and H281DRAFT_04385 are separated by 77 nucleotides
H281DRAFT_04382: H281DRAFT_04382 - hypothetical protein, at 96,203 to 96,961
_04382
H281DRAFT_04383: H281DRAFT_04383 - diguanylate cyclase with GAF sensor, at 97,094 to 98,074
_04383
H281DRAFT_04384: H281DRAFT_04384 - ElaA protein, at 98,163 to 98,675
_04384
H281DRAFT_04385: H281DRAFT_04385 - putative membrane protein, at 98,753 to 99,649
_04385
Position (kb) 97
98
99 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 96.206 kb on + strand at 96.206 kb on + strand at 96.207 kb on - strand at 96.207 kb on - strand at 96.207 kb on - strand at 96.210 kb on + strand at 96.211 kb on - strand at 96.211 kb on - strand at 96.581 kb on + strand, within H281DRAFT_04382 at 96.581 kb on + strand, within H281DRAFT_04382 at 96.582 kb on - strand at 96.582 kb on - strand, within H281DRAFT_04382 at 96.582 kb on - strand, within H281DRAFT_04382 at 96.587 kb on + strand, within H281DRAFT_04382 at 96.837 kb on + strand, within H281DRAFT_04382 at 96.895 kb on - strand at 96.959 kb on + strand at 96.972 kb on - strand at 97.056 kb on + strand at 97.057 kb on - strand at 97.057 kb on - strand at 97.165 kb on + strand at 97.166 kb on - strand at 97.241 kb on - strand, within H281DRAFT_04383 at 97.350 kb on + strand, within H281DRAFT_04383 at 97.351 kb on - strand, within H281DRAFT_04383 at 97.430 kb on + strand, within H281DRAFT_04383 at 97.430 kb on + strand, within H281DRAFT_04383 at 97.431 kb on - strand, within H281DRAFT_04383 at 97.776 kb on + strand, within H281DRAFT_04383 at 97.776 kb on + strand, within H281DRAFT_04383 at 97.777 kb on - strand, within H281DRAFT_04383 at 97.891 kb on + strand, within H281DRAFT_04383 at 97.892 kb on - strand, within H281DRAFT_04383 at 97.892 kb on - strand, within H281DRAFT_04383 at 97.948 kb on + strand, within H281DRAFT_04383 at 97.967 kb on + strand, within H281DRAFT_04383 at 97.967 kb on + strand, within H281DRAFT_04383 at 98.027 kb on + strand at 98.027 kb on + strand at 98.028 kb on - strand at 98.028 kb on - strand at 98.028 kb on - strand at 98.028 kb on - strand at 98.028 kb on - strand at 98.028 kb on - strand at 98.029 kb on + strand at 98.029 kb on + strand at 98.030 kb on - strand at 98.030 kb on - strand at 98.030 kb on - strand at 98.084 kb on + strand at 98.084 kb on + strand at 98.253 kb on + strand, within H281DRAFT_04384 at 98.254 kb on - strand, within H281DRAFT_04384 at 98.307 kb on + strand, within H281DRAFT_04384 at 98.307 kb on + strand, within H281DRAFT_04384 at 98.308 kb on - strand at 98.308 kb on - strand, within H281DRAFT_04384 at 98.410 kb on - strand, within H281DRAFT_04384 at 98.448 kb on - strand at 98.595 kb on + strand, within H281DRAFT_04384 at 98.596 kb on - strand, within H281DRAFT_04384 at 98.596 kb on - strand, within H281DRAFT_04384 at 98.596 kb on - strand, within H281DRAFT_04384 at 99.003 kb on + strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385 at 99.006 kb on - strand, within H281DRAFT_04385
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 96,206 + +0.7 96,206 + +0.3 96,207 - +0.5 96,207 - +1.8 96,207 - -0.1 96,210 + +0.7 96,211 - -0.8 96,211 - +0.8 96,581 + H281DRAFT_04382 0.50 -0.2 96,581 + H281DRAFT_04382 0.50 -0.3 96,582 - +3.3 96,582 - H281DRAFT_04382 0.50 -1.1 96,582 - H281DRAFT_04382 0.50 +0.2 96,587 + H281DRAFT_04382 0.51 -0.4 96,837 + H281DRAFT_04382 0.84 -0.1 96,895 - -0.3 96,959 + +0.5 96,972 - +0.5 97,056 + -0.9 97,057 - +0.3 97,057 - +1.5 97,165 + +0.8 97,166 - -0.6 97,241 - H281DRAFT_04383 0.15 +0.0 97,350 + H281DRAFT_04383 0.26 +1.2 97,351 - H281DRAFT_04383 0.26 -0.8 97,430 + H281DRAFT_04383 0.34 +0.2 97,430 + H281DRAFT_04383 0.34 -0.9 97,431 - H281DRAFT_04383 0.34 -0.7 97,776 + H281DRAFT_04383 0.70 -0.2 97,776 + H281DRAFT_04383 0.70 -1.1 97,777 - H281DRAFT_04383 0.70 +0.2 97,891 + H281DRAFT_04383 0.81 +0.1 97,892 - H281DRAFT_04383 0.81 -1.2 97,892 - H281DRAFT_04383 0.81 +0.3 97,948 + H281DRAFT_04383 0.87 +0.4 97,967 + H281DRAFT_04383 0.89 -0.5 97,967 + H281DRAFT_04383 0.89 +0.1 98,027 + +0.1 98,027 + +0.3 98,028 - +0.0 98,028 - +0.1 98,028 - +0.9 98,028 - +0.3 98,028 - +0.1 98,028 - -0.3 98,029 + -2.3 98,029 + -1.2 98,030 - -0.4 98,030 - +0.5 98,030 - -1.7 98,084 + -0.2 98,084 + -0.0 98,253 + H281DRAFT_04384 0.18 +1.3 98,254 - H281DRAFT_04384 0.18 -1.6 98,307 + H281DRAFT_04384 0.28 +0.2 98,307 + H281DRAFT_04384 0.28 +1.0 98,308 - +1.9 98,308 - H281DRAFT_04384 0.28 +0.1 98,410 - H281DRAFT_04384 0.48 -0.9 98,448 - -1.1 98,595 + H281DRAFT_04384 0.84 +0.1 98,596 - H281DRAFT_04384 0.84 -0.1 98,596 - H281DRAFT_04384 0.84 +0.5 98,596 - H281DRAFT_04384 0.84 +0.4 99,003 + H281DRAFT_04385 0.28 +0.3 99,006 - H281DRAFT_04385 0.28 -0.4 99,006 - H281DRAFT_04385 0.28 +1.3 99,006 - H281DRAFT_04385 0.28 -0.8 99,006 - H281DRAFT_04385 0.28 -1.0 99,006 - H281DRAFT_04385 0.28 +0.1 99,006 - H281DRAFT_04385 0.28 +1.1
Or see this region's nucleotide sequence