Experiment: 2'-Deoxyinosine 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04353 and H281DRAFT_04354 are separated by 115 nucleotides H281DRAFT_04354 and H281DRAFT_04355 are separated by 115 nucleotides H281DRAFT_04355 and H281DRAFT_04356 are separated by 83 nucleotides H281DRAFT_04356 and H281DRAFT_04357 are separated by 4 nucleotides
H281DRAFT_04353: H281DRAFT_04353 - 3-oxoacyl-[acyl-carrier-protein] synthase II, at 70,143 to 71,429
_04353
H281DRAFT_04354: H281DRAFT_04354 - hypothetical protein, at 71,545 to 71,928
_04354
H281DRAFT_04355: H281DRAFT_04355 - RNA polymerase, sigma-24 subunit, RpoE, at 72,044 to 72,643
_04355
H281DRAFT_04356: H281DRAFT_04356 - anti sigma-E protein, RseA, at 72,727 to 73,341
_04356
H281DRAFT_04357: H281DRAFT_04357 - sigma E regulatory protein, MucB/RseB, at 73,346 to 74,389
_04357
Position (kb) 72
73 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 71.518 kb on + strand at 71.519 kb on - strand at 71.593 kb on + strand, within H281DRAFT_04354 at 71.593 kb on + strand, within H281DRAFT_04354 at 71.593 kb on + strand, within H281DRAFT_04354 at 71.594 kb on - strand, within H281DRAFT_04354 at 71.594 kb on - strand, within H281DRAFT_04354 at 71.595 kb on + strand, within H281DRAFT_04354 at 71.595 kb on + strand at 71.595 kb on + strand, within H281DRAFT_04354 at 71.595 kb on + strand, within H281DRAFT_04354 at 71.595 kb on - strand, within H281DRAFT_04354 at 71.596 kb on - strand, within H281DRAFT_04354 at 71.596 kb on - strand, within H281DRAFT_04354 at 71.596 kb on - strand, within H281DRAFT_04354 at 71.596 kb on - strand, within H281DRAFT_04354 at 71.596 kb on - strand, within H281DRAFT_04354 at 71.664 kb on + strand, within H281DRAFT_04354 at 71.932 kb on + strand at 71.941 kb on + strand at 71.973 kb on - strand at 71.998 kb on - strand at 71.998 kb on - strand at 71.998 kb on - strand at 72.677 kb on + strand at 72.677 kb on + strand at 72.686 kb on + strand at 72.686 kb on + strand at 72.711 kb on + strand at 72.711 kb on + strand at 72.711 kb on + strand at 72.712 kb on - strand at 72.712 kb on - strand at 72.878 kb on - strand, within H281DRAFT_04356 at 73.084 kb on - strand, within H281DRAFT_04356 at 73.247 kb on - strand, within H281DRAFT_04356 at 73.339 kb on + strand at 73.339 kb on + strand at 73.340 kb on - strand at 73.340 kb on - strand at 73.369 kb on - strand at 73.369 kb on - strand at 73.376 kb on - strand at 73.429 kb on + strand at 73.547 kb on + strand, within H281DRAFT_04357 at 73.589 kb on + strand, within H281DRAFT_04357
Per-strain Table
Position Strand Gene LocusTag Fraction 2'-Deoxyinosine 5 mM (C) remove 71,518 + +0.6 71,519 - +0.1 71,593 + H281DRAFT_04354 0.12 -0.8 71,593 + H281DRAFT_04354 0.12 +0.4 71,593 + H281DRAFT_04354 0.12 +0.3 71,594 - H281DRAFT_04354 0.13 -0.4 71,594 - H281DRAFT_04354 0.13 +0.6 71,595 + H281DRAFT_04354 0.13 +0.4 71,595 + +0.5 71,595 + H281DRAFT_04354 0.13 +0.3 71,595 + H281DRAFT_04354 0.13 -0.2 71,595 - H281DRAFT_04354 0.13 -0.3 71,596 - H281DRAFT_04354 0.13 -0.1 71,596 - H281DRAFT_04354 0.13 -0.8 71,596 - H281DRAFT_04354 0.13 -0.9 71,596 - H281DRAFT_04354 0.13 -0.2 71,596 - H281DRAFT_04354 0.13 -0.8 71,664 + H281DRAFT_04354 0.31 +0.5 71,932 + -0.6 71,941 + -0.3 71,973 - -0.1 71,998 - -0.0 71,998 - +0.8 71,998 - +0.7 72,677 + -0.2 72,677 + +1.7 72,686 + +0.2 72,686 + +0.2 72,711 + +2.9 72,711 + +0.0 72,711 + -1.6 72,712 - -1.6 72,712 - -1.6 72,878 - H281DRAFT_04356 0.25 +0.9 73,084 - H281DRAFT_04356 0.58 -1.1 73,247 - H281DRAFT_04356 0.85 -1.6 73,339 + -2.8 73,339 + -0.1 73,340 - +1.0 73,340 - -0.1 73,369 - +0.9 73,369 - -0.5 73,376 - -0.9 73,429 + -1.0 73,547 + H281DRAFT_04357 0.19 +0.0 73,589 + H281DRAFT_04357 0.23 -0.8
Or see this region's nucleotide sequence